MitoProteome: mitochondrial protein sequence database and annotation system. - Dawn Cotter; Purnima Guda; Eoin Fahy; Shankar Subramaniam (Nucleic Acids Res., 2004)

LMPD: LIPID MAPS proteome database. - Dawn Cotter; Andreia Maer; Chittibabu Guda; Brian Saunders; Shankar Subramaniam (Nucleic Acids Res., 2006)

LIPID MAPS online tools for lipid research. - Eoin Fahy; Manish Sud; Dawn Cotter; Shankar Subramaniam (Nucleic Acids Res., 2007)

LMSD: LIPID MAPS structure database. - Manish Sud; Eoin Fahy; Dawn Cotter; Alex Brown; Edward A. Dennis; Christopher K. Glass; Alfred H. Merrill Jr.; Robert C. Murphy; Christian R. H. Raetz; David W. Russell; Shankar Subramaniam (Nucleic Acids Res., 2007)

An editor for pathway drawing and data visualization in the Biopathways Workbench. - Robert W. Byrnes; Dawn Cotter; Andreia Maer; Joshua Li 001; David Nadeau; Shankar Subramaniam (BMC Syst. Biol., 2009)

Metabolomics Workbench: An international repository for metabolomics data and metadata, metabolite standards, protocols, tutorials and training, and analysis tools. - Manish Sud; Eoin Fahy; Dawn Cotter; Kenan Azam; Ilango Vadivelu; Charles F. Burant; Arthur Edison; Oliver Fiehn; Richard M. Higashi; K. Sreekumaran Nair; Susan Sumner; Shankar Subramaniam (Nucleic Acids Res., 2016)