iEssLnc: quantitative estimation of lncRNA gene essentialities with meta-path-guided random walks on the lncRNA-protein interaction network. - Ying-Ying Zhang; De-Min Liang; Pu-Feng Du (Briefings Bioinform., 2023)

scMUG: deep clustering analysis of single-cell RNA-seq data on multiple gene functional modules. - De-Min Liang; Pu-Feng Du (Briefings Bioinform., 2025)