Factorization based dilution of biochemical fluids with micro-electrode-dot-array biochips. - Sohini Saha; Debraj Kundu; Sudip Roy 001; Sukanta Bhattacharjee; Krishnendu Chakrabarty; Partha Pratim Chakrabarti; Bhargab B. Bhattacharya (ASP-DAC, 2019)

Optimization of Fluid Loading on Programmable Microfluidic Devices for Bio-protocol Execution. - Satoru Maruyama; Debraj Kundu; Shigeru Yamashita; Sudip Roy 001 (ASP-DAC, 2020)

Transport-Free Module Binding for Sample Preparation using Microfluidic Fully Programmable Valve Arrays. - Gautam Choudhary; Sandeep Pal; Debraj Kundu; Sukanta Bhattacharjee; Shigeru Yamashita; Bing Li 005; Ulf Schlichtmann; Sudip Roy 001 (DATE, 2020)

Fluid-to-cell assignment and fluid loading on programmable microfluidic devices for bioprotocol execution. - Debraj Kundu; Jitendra Giri; Sataru Maruyama; Sudip Roy 001; Shigeru Yamashita (Integr., 2021)

MEDA Biochip based Single- Target Fluidic Mixture Preparation with Minimum Wastage. - Debraj Kundu; Sudip Roy 001 (DSD, 2022)

Mixing Models as Integer Factorization: A Key to Sample Preparation With Microfluidic Biochips. - Debraj Kundu; Sudip Roy 001; Sukanta Bhattacharjee; Sohini Saha; Krishnendu Chakrabarty; Partha Pratim Chakrabarti; Bhargab B. Bhattacharya (IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2022)

Reinforcement Learning based Module Placement for Enhancing Reliability of MEDA Digital Microfluidic Biochips. - Debraj Kundu; Gadikoyila Satya Vamsi; Karnati Vivek Veman; Gurram Mahidhar; Sudip Roy 001 (ACM Great Lakes Symposium on VLSI, 2023)

Transport-Free Placement of Mixers for Realizing Bioprotocol on Programmable Microfluidic Devices. - Masataka Hirai; Debraj Kundu; Shigeru Yamashita; Sudip Roy 001; Hiroyuki Tomiyama (VLSID, 2023)

Preparing Fluid Samples Under Retention Time Constraints Using Flow-Based Microfluidic Biochips. - Debraj Kundu; Venkata Lavanya Sarvasiddi; Sukanta Bhattacharjee; Shigeru Yamashita; Sudip Roy 001 (IEEE Trans. Comput. Aided Des. Integr. Circuits Syst., 2023)

Multi-target Fluid Mixing in MEDA Biochips: Theory and an Attempt toward Waste Minimization. - Debraj Kundu; Sudip Roy 001 (ACM Trans. Design Autom. Electr. Syst., 2023)

Retention Time Constrained Bioassay Scheduling on Flow-Based Microfluidic Biochips with Latches. - Tamal Mandal; Debraj Kundu; Sudip Roy 001 (VLSID, 2024)

Loading-Aware Mixing-Efficient Sample Preparation on Programmable Microfluidic Device. - Debraj Kundu; Tsun-Ming Tseng; Shigeru Yamashita; Ulf Schlichtmann (DATE, 2025)