rHAT: fast alignment of noisy long reads with regional hashing. - Bo Liu 023; Dengfeng Guan; Mingxiang Teng; Yadong Wang 001 (Bioinform., 2016)

deSPI: efficient classification of metagenomics reads with lightweight de Bruijn graph-based reference indexing. - Dengfeng Guan; Bo Liu 023; Yadong Wang 001 (BIBM, 2018)

Fast variation-aware read alignment with deBGA-VARA. - Hongzhe Guo; Bo Liu 023; Dengfeng Guan; Yilei Fu; Yadong Wang 001 (BIBM, 2018)

Fast read alignment with incorporation of known genomic variants. - Hongzhe Guo; Bo Liu 023; Dengfeng Guan; Yilei Fu; Yadong Wang 001 (BMC Medical Informatics Decis. Mak., 2019)

Identifying and removing haplotypic duplication in primary genome assemblies. - Dengfeng Guan; Shane A. McCarthy; Jonathan Wood; Kerstin Howe; Yadong Wang; Richard Durbin (Bioinform., 2020)

Efficient iterative Hi-C scaffolder based on N-best neighbors. - Dengfeng Guan; Shane A. McCarthy; Zemin Ning; Guohua Wang; Yadong Wang; Richard Durbin (BMC Bioinform., 2021)

Correction to: Efficient iterative Hi-C scaffolder based on N-best neighbors. - Dengfeng Guan; Shane A. McCarthy; Zemin Ning; Guohua Wang; Yadong Wang; Richard Durbin (BMC Bioinform., 2021)