RiboProP: a probabilistic ribosome positioning algorithm for ribosome profiling. - Dengke Zhao; William D. Baez; Kurt Fredrick; Ralf Bundschuh (Bioinform., 2019)

MESCNN: Magnitude estimation system based on convolutional neural networks. - Jian Liao; Siran Yang; Yanwei Wang; Jianming Wang; Dengke Zhao; Zhaoyan Li; Zifa Wang (Softw. Impacts, 2025)

Ebdfes: Post-earthquake building damage and fatality estimation system. - Dengke Zhao; Siran Yang; Jianming Wang; Ji'an Liao; Zhaoyan Li; Zifa Wang (Softw. Impacts, 2025)

A Federated Learning-Based Data Augmentation Method for Privacy Preservation Under Heterogeneous Data. - Yunpeng Xiao 001; Dengke Zhao; Xufeng Li; Tun Li; Rong Wang 003; Guoyin Wang 001 (IEEE Trans. Mob. Comput., 2025)