Topological Rearrangements and Local Search Method for Tandem Duplication Trees. - Denis Bertrand; Olivier Gascuel (IEEE ACM Trans. Comput. Biol. Bioinform., 2005)

Evolution of Tandemly Repeated Sequences Through Duplication and Inversion. - Denis Bertrand; Mathieu Lajoie; Nadia El-Mabrouk; Olivier Gascuel (Comparative Genomics, 2006)

Reconstructing the duplication history of tandemly repeated sequences. - Olivier Gascuel; Denis Bertrand; Olivier Elemento (Mathematics of Evolution and Phylogeny, 2007)

Evolution of Tandemly Arrayed Genes in Multiple Species. - Mathieu Lajoie; Denis Bertrand; Nadia El-Mabrouk (RECOMB-CG, 2007)

Duplication and Inversion History of a Tandemly Repeated Genes Family. - Mathieu Lajoie; Denis Bertrand; Nadia El-Mabrouk; Olivier Gascuel (J. Comput. Biol., 2007)

A Phylogenetic Approach to Genetic Map Refinement. - Denis Bertrand; Mathieu Blanchette; Nadia El-Mabrouk (RECOMB-CG, 2008)

Inferring Ancestral Gene Orders for a Family of Tandemly Arrayed Genes. - Denis Bertrand; Mathieu Lajoie; Nadia El-Mabrouk (J. Comput. Biol., 2008)

Genetic Map Refinement Using a Comparative Genomic Approach. - Denis Bertrand; Mathieu Blanchette; Nadia El-Mabrouk (J. Comput. Biol., 2009)

Advances on Genome Duplication Distances. - Yves Gagnon; Olivier Tremblay Savard; Denis Bertrand; Nadia El-Mabrouk (RECOMB-CG, 2010)

Reconstruction of Ancestral Genome Subject to Whole Genome Duplication, Speciation, Rearrangement and Loss. - Denis Bertrand; Yves Gagnon; Mathieu Blanchette; Nadia El-Mabrouk (WABI, 2010)

Evolution of orthologous tandemly arrayed gene clusters. - Olivier Tremblay Savard; Denis Bertrand; Nadia El-Mabrouk (BMC Bioinform., 2011)

Genome Halving and Double Distance with Losses. - Olivier Tremblay Savard; Yves Gagnon; Denis Bertrand; Nadia El-Mabrouk (J. Comput. Biol., 2011)

FinIS: Improved in silico Finishing Using an Exact Quadratic Programming Formulation. - Song Gao 004; Denis Bertrand; Niranjan Nagarajan (WABI, 2012)

Recommended practice: Systems of systems considerations in the development of systems. - Judith Dahmann; Ase Jakobsson; Kristen J. Baldwin; Denis Bertrand (SysCon, 2015)

Predicting Cancer Drug Response using a Recommender System. - Chayaporn Suphavilai; Denis Bertrand; Niranjan Nagarajan (Bioinform., 2018)