YBYRÁ facilitates comparison of large phylogenetic trees. - Denis Machado (BMC Bioinform., 2015)

Predicting Antibody and ACE2 Affinity for SARS-CoV-2 BA.2.86 and JN.1 with In Silico Protein Modeling and Docking. - Shirish Yasa; Sayal Guirales-Medrano; Denis Jacob Machado; Colby T. Ford; Daniel Janies (IEEE DataPort, 2024)