Creating DEMO Presentations on the Base of Visualization Model. - Elena V. Zudilova; Denis P. Shamonin (HPCN Europe, 2000)

Integration of Blood Flow Visualization on the Grid: The FlowFish/GVK Approach. - Alfredo Tirado-Ramos; Hans Ragas; Denis P. Shamonin; Herbert Rosmanith; Dieter Kranzlmüller (European Across Grids Conference, 2004)

A Problem Solving Environment for Image-Based Computational Hemodynamics. - Lilit Abrahamyan; Jorrit A. Schaap; Alfons G. Hoekstra; Denis P. Shamonin; Frieke M. A. Box; Rob J. van der Geest; Johan H. C. Reiber; Peter M. A. Sloot (International Conference on Computational Science (1), 2005)

Towards local estimation of emphysema progression using image registration. - Marius Staring; M. Els Bakker; Denis P. Shamonin; Jan Stolk; Johan H. C. Reiber; Berend C. Stoel (Image Processing, 2009)

A Strain Energy Filter for 3D Vessel Enhancement. - Changyan Xiao; Marius Staring; Denis P. Shamonin; Johan H. C. Reiber; Jan Stolk; Berend C. Stoel (MICCAI (3), 2010)

A strain energy filter for 3D vessel enhancement with application to pulmonary CT images. - Changyan Xiao; Marius Staring; Denis P. Shamonin; Johan H. C. Reiber; Jan Stolk; Berend C. Stoel (Medical Image Anal., 2011)

Automatic lung lobe segmentation of COPD patients using iterative B-spline fitting. - Denis P. Shamonin; Marius Staring; M. Els Bakker; Changyan Xiao; Jan Stolk; Johan H. C. Reiber; Berend C. Stoel (Image Processing, 2012)

A derivative of stick filter for pulmonary fissure detection in CT images. - Changyan Xiao; Marius Staring; Juan Wang; Denis P. Shamonin; Berend C. Stoel (Image Processing, 2013)

Fast Parallel Image Registration on CPU and GPU for Diagnostic Classification of Alzheimer's Disease. - Denis P. Shamonin; Esther Bron; Boudewijn P. F. Lelieveldt; Marion Smits; Stefan Klein 001; Marius Staring (Frontiers Neuroinformatics, 2013)

Multiscale Bi-Gaussian Filter for Adjacent Curvilinear Structures Detection With Application to Vasculature Images. - Changyan Xiao; Marius Staring; Yaonan Wang 001; Denis P. Shamonin; Berend C. Stoel (IEEE Trans. Image Process., 2013)

Healthy Vessel Wall Detection Using U-Net in Optical Coherence Tomography. - Shengnan Liu; Denis P. Shamonin; Guillaume Zahnd; Anton F. W. van der Steen; Theo van Walsum; Gijs van Soest (MLMECH/CVII-STENT@MICCAI, 2019)

Integrated feature analysis for deep learning interpretation and class activation maps. - Yanli Li 002; Tahereh Hassanzadeh; Denis P. Shamonin; Monique Reijnierse; Annette H. M. van der Helm-van Mil; Berend C. Stoel (CoRR, 2024)

A deep learning-based comparative MRI model to detect inflammatory changes in rheumatoid arthritis. - Tahereh Hassanzadeh; Denis P. Shamonin; Yanli Li 002; Doortje I. Krijbolder; Monique Reijnierse; Annette H. M. van der Helm-van Mil; Berend C. Stoel (Biomed. Signal Process. Control., 2024)

Feature analysis for proper intensity scaling and feature distinction in class activation maps. - Yanli Li 002; Denis P. Shamonin; Tahereh Hassanzadeh; Monique Reijnierse; Annette H. M. van der Helm-van Mil; Berend C. Stoel (Knowl. Based Syst., 2025)