Segment Choice Models: Feature-Rich Models for Global Distortion in Statistical Machine Translation. - Roland Kuhn 001; Denis Yuen; Michel Simard; Patrick Paul; George F. Foster; Eric Joanis; Howard Johnson (HLT-NAACL, 2006)

Automated protein (re)sequencing with MS/MS and a homologous database yields almost full coverage and accuracy. - Xiaowen Liu; Yonghua Han; Denis Yuen; Bin Ma 002 (Bioinform., 2009)

The Dockstore: enabling modular, community-focused sharing of Docker-based genomics tools and workflows. - Brian D. O'Connor; Denis Yuen; Vincent Chung; Andrew G. Duncan; Xiangkun Liu; Janice Patricia; Benedict Paten; Lincoln Stein; Vincent Ferretti (F1000Research, 2017)

The Dockstore: enhancing a community platform for sharing reproducible and accessible computational protocols. - Denis Yuen; Louise Cabansay; Andrew G. Duncan; Gary Luu; Gregory Hogue; Charles Overbeck; Natalie Perez; Walt Shands; David Steinberg; Chaz Reid; Nneka Olunwa; Richard Hansen; et al. (Nucleic Acids Res., 2021)

Applying the FAIR Principles to Computational Workflows. - Sean R. Wilkinson; Meznah Aloqalaa; Khalid Belhajjame; Michael R. Crusoe; Bruno de Paula Kinoshita; Luiz Gadelha; Daniel Garijo; Ove Johan Ragnar Gustafsson; Nick S. Juty; Sehrish Kanwal; Farah Zaib Khan; Johannes Köster; et al. (CoRR, 2024)