Indel seeds for homology search. - Denise Y. F. Mak; Yevgeniy Gelfand; Gary Benson (ISMB (Supplement of Bioinformatics), 2006)

All Hits All The Time: Parameter Free Calculation of Seed Sensitivity. - Denise Y. F. Mak; Gary Benson (APBC, 2007)

Exact Distribution of a Spaced Seed Statistic for DNA Homology Detection. - Gary Benson; Denise Y. F. Mak (SPIRE, 2008)

Consensus RNA Secondary Structure Prediction by Ranking k-Length Stems. - Denise Y. F. Mak; Gary Benson (BIOCOMP, 2009)

All hits all the time: parameter-free calculation of spaced seed sensitivity. - Denise Y. F. Mak; Gary Benson (Bioinform., 2009)

BPG: Seamless, automated and interactive visualization of scientific data. - Christine P'ng; Jeffrey Green; Lauren C. Chong; Daryl Waggott; Stephenie D. Prokopec; Mehrdad Shamsi; Francis Nguyen; Denise Y. F. Mak; Felix Lam; Marco A. Albuquerque; Ying Wu 012; Esther H. Jung; et al. (BMC Bioinform., 2019)

Assessing the quality of clinical and administrative data extracted from hospitals: the General Medicine Inpatient Initiative (GEMINI) experience. - Amol A. Verma; Sachin V. Pasricha; Hae Young Jung; Vladyslav Kushnir; Denise Y. F. Mak; Radha Koppula; Yishan Guo; Janice L. Kwan; Lauren Lapointe-Shaw; Shail Rawal; Terence Tang; Adina Weinerman; et al. (J. Am. Medical Informatics Assoc., 2021)

Optimizing the efficiency and effectiveness of data quality assurance in a multicenter clinical dataset. - Anne Fu; Trong Shen; Surain B. Roberts; Weihan Liu; Shruthi Vaidyanathan; Kayley-Jasmin Marchena-Romero; Yuen Yu Phyllis Lam; Kieran Shah; Denise Y. F. Mak; Stephen Chin; Seth J. Stern; Radha Koppula; et al. (J. Am. Medical Informatics Assoc., 2025)