StrAl: progressive alignment of non-coding RNA using base pairing probability vectors in quadratic time. - Deniz Dalli; Andreas Wilm; Indra Mainz; Gerhard Steger (Bioinform., 2006)

ListGraph: Visuelle Analyse von RDF-Daten. - Philipp Heim; Deniz Dalli; Jürgen Ziegler 001 (MuC, 2008)