A Statistical Recurrent Model on the Manifold of Symmetric Positive Definite Matrices. - Rudrasis Chakraborty; Chun-Hao Yang; Xingjian Zhen; Monami Banerjee; Derek B. Archer; David E. Vaillancourt; Vikas Singh; Baba C. Vemuri (NeurIPS, 2018)

Statistical Recurrent Models on Manifold valued Data. - Rudrasis Chakraborty; Chun-Hao Yang; Xingjian Zhen; Monami Banerjee; Derek B. Archer; David E. Vaillancourt; Vikas Singh; Baba C. Vemuri (CoRR, 2018)

DMR-CNN: A CNN Tailored For DMR Scans With Applications To PD Classification. - Monami Banerjee; Rudrasis Chakraborty; Derek B. Archer; David E. Vaillancourt; Baba C. Vemuri (ISBI, 2019)

Development of a transcallosal tractography template and its application to dementia. - Derek B. Archer; Stephen A. Coombes; Nikolaus R. McFarland; Steven DeKosky; David E. Vaillancourt (NeuroImage, 2019)

Comparing voxel- and feature-wise harmonization of complex graph measures from multiple sites for structural brain network investigation of aging. - Nancy R. Newlin; Leon Y. Cai; Tianyuan Yao; Derek B. Archer; Kurt G. Schilling; Timothy J. Hohman; Kimberly R. Pechman; Angela L. Jefferson; Andrea T. Shafer; Susan M. Resnick; Bennett A. Landman (Image Processing, 2023)

Predicting Age from White Matter Diffusivity with Residual Learning. - Chenyu Gao; Michael E. Kim; Ho Hin Lee; Qi Yang 004; Nazirah Mohd Khairi; Praitayini Kanakaraj; Nancy R. Newlin; Derek B. Archer; Angela L. Jefferson; Warren D. Taylor; Brian D. Boyd; Lori L. Beason-Held; et al. (CoRR, 2023)

Ts-FWE: Token-Aware Single-Shell Free Water Estimation for Brain Diffusion MRI. - Tianyuan Yao; Derek B. Archer; Zhiyuan Li 012; Leon Y. Cai; Praitayini Kanakaraj; Nancy Newlin; Quan Liu 002; Ruining Deng; Can Cui 006; Shunxing Bao; Kurt Schilling; Bennett A. Landman; et al. (CDMRI@MICCAI, 2024)

Field-of-View Extension for Diffusion MRI via Deep Generative Models. - Chenyu Gao; Shunxing Bao; Michael E. Kim; Nancy Newlin; Praitayini Kanakaraj; Tianyuan Yao; Gaurav Rudravaram; Yuankai Huo; Daniel Moyer; Kurt Schilling; Walter Kukull; Arthur W. Toga; et al. (CoRR, 2024)

Scalable, reproducible, and cost-effective processing of large-scale medical imaging datasets. - Michael E. Kim; Karthik Ramadass; Chenyu Gao; Praitayini Kanakaraj; Nancy R. Newlin; Gaurav Rudravaram; Kurt G. Schilling; Blake E. Dewey; Derek B. Archer; Timothy J. Hohman; Zhiyuan Li 012; Shunxing Bao; et al. (CoRR, 2024)

Multi-Modality Conditioned Variational U-Net for Field-of-View Extension in Brain Diffusion MRI. - Zhiyuan Li 012; Tianyuan Yao; Praitayini Kanakaraj; Chenyu Gao; Shunxing Bao; Lianrui Zuo; Michael E. Kim; Nancy R. Newlin; Gaurav Rudravaram; Nazirah Mohd Khairi; Yuankai Huo; Kurt G. Schilling; et al. (CoRR, 2024)

Scalable quality control on processing of large diffusion-weighted and structural magnetic resonance imaging datasets. - Michael E. Kim; Chenyu Gao; Karthik Ramadass; Praitayini Kanakaraj; Nancy R. Newlin; Gaurav Rudravaram; Kurt G. Schilling; Blake E. Dewey; David A. Bennett; Sid OBryant; Robert C. Barber; Derek B. Archer; et al. (CoRR, 2024)

Brain age identification from diffusion MRI synergistically predicts neurodegenerative disease. - Chenyu Gao; Michael E. Kim; Karthik Ramadass; Praitayini Kanakaraj; Aravind R. Krishnan; Adam M. Saunders; Nancy R. Newlin; Ho Hin Lee; Qi Yang 004; Warren D. Taylor; Brian D. Boyd; Lori L. Beason-Held; et al. (CoRR, 2024)

DeepN4: Learning N4ITK Bias Field Correction for T1-weighted Images. - Praitayini Kanakaraj; Tianyuan Yao; Leon Y. Cai; Ho Hin Lee; Nancy R. Newlin; Michael E. Kim; Chenyu Gao; Kimberly R. Pechman; Derek B. Archer; Timothy J. Hohman; Angela L. Jefferson; Lori L. Beason-Held; et al. (Neuroinformatics, 2024)

Polyhedra Encoding Transformers: Enhancing Diffusion MRI Analysis Beyond Voxel and Volumetric Embedding. - Tianyuan Yao; Zhiyuan Li 012; Praitayini Kanakaraj; Derek B. Archer; Kurt Schilling; Lori L. Beason-Held; Susan M. Resnick; Bennett A. Landman; Yuankai Huo (CoRR, 2025)

Pitfalls of defacing whole-head MRI: re-identification risk with diffusion models and compromised research potential. - Chenyu Gao; Kaiwen Xu; Michael E. Kim; Lianrui Zuo; Zhiyuan Li 012; Derek B. Archer; Timothy J. Hohman; Ann Zenobia Moore; Luigi Ferrucci; Lori L. Beason-Held; Susan M. Resnick; Christos Davatzikos; et al. (CoRR, 2025)