On-Line Application Performance Monitoring of Blood Flow Simulation in Computational Grid Architectures. - Alfredo Tirado-Ramos; Derek Groen; Peter M. A. Sloot (CBMS, 2005)

Experience with the International Testbed in the CrossGrid Project. - Jorge A. T. Gomes; Mário David; J. Martins; Luís Bernardo; Ariel García; Markus Hardt; Harald Kornmayer; J. Marco 001; R. Marco; D. Rodríguez; Iván Díaz; D. Cano; et al. (EGC, 2005)

Distributed N-body Simulation on the Grid Using Dedicated Hardware - Derek Groen; Simon Portegies Zwart; Steve McMillan; Jun Makino (CoRR, 2007)

A parallel gravitational N-body kernel - Simon Portegies Zwart; Steve McMillan; Derek Groen; Alessia Gualandris; Michael Sipior; Willem Vermin (CoRR, 2007)

Simulating N-Body Systems on the Grid Using Dedicated Hardware. - Derek Groen; Simon Portegies Zwart; Steve McMillan; Jun Makino (ICCS (1), 2008)

A Multiphysics and Multiscale Software Environment for Modeling Astrophysical Systems. - Simon Portegies Zwart; Steve McMillan; Breanndán Ó Nualláin; Douglas Heggie; James Lombardi; Piet Hut; Sambaran Banerjee; Houria Belkus; Tassos Fragos; John Fregeau; Michiko Fuji; Evghenii Gaburov; et al. (ICCS (2), 2008)

Running Parallel Applications with Topology-Aware Grid Middleware. - Pavel Bar; Camille Coti; Derek Groen; Thomas Hérault; Valentin Kravtsov; Assaf Schuster; Martin T. Swain (eScience, 2009)

On the Origin of Grid Species: The Living Application. - Derek Groen; Stefan Harfst; Simon Portegies Zwart (ICCS (1), 2009)

The Living Application: a Self-Organising System for Complex Grid Tasks - Derek Groen; Stefan Harfst; Simon Portegies Zwart (CoRR, 2009)

Simulating the Universe on an Intercontinental Grid. - Simon Portegies Zwart; Derek Groen; Tomoaki Ishiyama; Keigo Nitadori; Junichiro Makino; Cees de Laat; Steve McMillan; Kei Hiraki; Stefan Harfst; Paola Grosso (Computer, 2010)

Simulating the universe on an intercontinental grid of supercomputers - Simon Portegies Zwart; Tomoaki Ishiyama; Derek Groen; Keigo Nitadori; Junichiro Makino; Cees de Laat; Stephen L. W. McMillan; Kei Hiraki; Stefan Harfst; Paola Grosso (CoRR, 2010)

A Light-Weight Communication Library for Distributed Computing - Derek Groen; Steven Rieder; Paola Grosso; Cees de Laat; Simon Portegies Zwart (CoRR, 2010)

The Living Application: a Self-Organizing System for Complex Grid Tasks. - Derek Groen; Stefan Harfst; Simon Portegies Zwart (Int. J. High Perform. Comput. Appl., 2010)

A platform independent communication library for distributed computing. - Derek Groen; Steven Rieder; Paola Grosso; Cees de Laat; Simon Portegies Zwart (ICCS, 2010)

Modelling Distributed Multiscale Simulation Performance: An Application to Nanocomposites. - Derek Groen; James J. Suter; Peter V. Coveney (e-Science Workshops, 2011)

Taxonomy of Multiscale Computing Communities. - Derek Groen; Stefan J. Zasada; Peter V. Coveney (e-Science Workshops, 2011)

Developing an infrastructure to support multiscale modelling and simulation. - Stefan J. Zasada; Derek Groen; Peter V. Coveney (TG, 2011)

High Performance Gravitational N-body Simulations on a Planet-wide Distributed Supercomputer - Derek Groen; Simon Portegies Zwart; Tomoaki Ishiyama; Junichiro Makino (CoRR, 2011)

High performance cosmological simulations on a grid of supercomputers - Derek Groen; Steven Rieder; Simon Portegies Zwart (CoRR, 2011)

Distributed Infrastructure for Multiscale Computing. - Stefan J. Zasada; Mariusz Mamonski; Derek Groen; Joris Borgdorff; Ilya Saverchenko; Tomasz Piontek; Krzysztof Kurowski; Peter V. Coveney (DS-RT, 2012)

Analyzing and Modeling the Performance of the HemeLB Lattice-Boltzmann Simulation Environment - Derek Groen; James Hetherington; Hywel B. Carver; Rupert W. Nash; Miguel O. Bernabeu; Peter V. Coveney (CoRR, 2012)

Coalesced communication: a design pattern for complex parallel scientific software - Hywel B. Carver; Derek Groen; James Hetherington; Rupert W. Nash; Miguel O. Bernabeu; Peter V. Coveney (CoRR, 2012)

Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations - Derek Groen; Joris Borgdorff; Carles Bona-Casas; James Hetherington; Rupert W. Nash; Stefan J. Zasada; Ilya Saverchenko; Mariusz Mamonski; Krzysztof Kurowski; Miguel O. Bernabeu; Alfons G. Hoekstra; Peter V. Coveney (CoRR, 2012)

Choice of blood rheology model has minor impact on computational assessment of shear stress mediated vascular risk - Miguel O. Bernabeu; Rupert W. Nash; Derek Groen; Hywel B. Carver; James Hetherington; Timm Krüger; Peter V. Coveney (CoRR, 2012)

Multiscale Computing with the Multiscale Modeling Library and Runtime Environment. - Joris Borgdorff; Mariusz Mamonski; Bartosz Bosak; Derek Groen; Mohamed Ben Belgacem; Krzysztof Kurowski; Alfons G. Hoekstra (ICCS, 2013)

Support for Multiscale Simulations with Molecular Dynamics. - Katarzyna Rycerz; Eryk Ciepiela; Grzegorz Dyk; Derek Groen; Tomasz Gubala; Daniel Harezlak; Maciej Pawlik; James J. Suter; Stefan J. Zasada; Peter V. Coveney; Marian Bubak (ICCS, 2013)

Computer simulations reveal complex distribution of haemodynamic forces in a mouse retina model of angiogenesis. - Miguel O. Bernabeu; Claudio A. Franco; Martin Jones; Jens H. Nielsen; Timm Krüger; Rupert W. Nash; Derek Groen; James Hetherington; Holger Gerhardt; Peter V. Coveney (CoRR, 2013)

MPWide: a light-weight library for efficient message passing over wide area networks. - Derek Groen; Steven Rieder; Simon Portegies Zwart (CoRR, 2013)

Analysing and modelling the performance of the HemeLB lattice-Boltzmann simulation environment. - Derek Groen; James Hetherington; Hywel B. Carver; Rupert W. Nash; Miguel O. Bernabeu; Peter V. Coveney (J. Comput. Sci., 2013)

Weighted Decomposition in High-Performance Lattice-Boltzmann Simulations: Are Some Lattice Sites More Equal than Others? - Derek Groen; David Abou Chacra; Rupert W. Nash; Jirí Jaros; Miguel O. Bernabeu; Peter V. Coveney (EASC, 2014)

Survey of Multiscale and Multiphysics Applications and Communities. - Derek Groen; Stefan J. Zasada; Peter V. Coveney (Comput. Sci. Eng., 2014)

Distributed multiscale computing with MUSCLE 2, the Multiscale Coupling Library and Environment. - Joris Borgdorff; Mariusz Mamonski; Bartosz Bosak; Krzysztof Kurowski; Mohamed Ben Belgacem; Bastien Chopard; Derek Groen; Peter V. Coveney; Alfons G. Hoekstra (J. Comput. Sci., 2014)

Ten Simple Rules for Effective Computational Research. - James M. Osborne; Miguel O. Bernabeu; Maria Bruna; Ben Calderhead; Jonathan Cooper; Neil Dalchau; Sara-Jane Dunn; Alexander G. Fletcher; Robin Freeman; Derek Groen; Bernhard Knapp; Greg J. McInerny; et al. (PLoS Comput. Biol., 2014)

From Thread to Transcontinental Computer: Disturbing Lessons in Distributed Supercomputing. - Derek Groen; Simon Portegies Zwart (e-Science, 2015)

Multiscale Modelling and Simulation Workshop: 12 Years of Inspiration. - Valeria V. Krzhizhanovskaya; Derek Groen; B. Bozak; Alfons G. Hoekstra (ICCS, 2015)

Software development practices in academia: a case study comparison. - Derek Groen; Xiaohu Guo; James A. Grogan; Ulf D. Schiller; James M. Osborne (CoRR, 2015)

An automated multiscale ensemble simulation approach for vascular blood flow. - Mohamed A. Itani; Ulf D. Schiller; Sebastian Schmieschek; James Hetherington; Miguel O. Bernabeu; Hoskote Chandrashekar; Fergus Robertson; Peter V. Coveney; Derek Groen (J. Comput. Sci., 2015)

Ten Simple Rules for a Successful Cross-Disciplinary Collaboration. - Bernhard Knapp; Rémi Bardenet; Miguel O. Bernabeu; Rafel Bordas; Maria Bruna; Ben Calderhead; Jonathan Cooper; Alexander G. Fletcher; Derek Groen; Bram Kuijper; Joanna Lewis; Greg J. McInerny; et al. (PLoS Comput. Biol., 2015)

Simulating Refugee Movements: Where Would You Go? - Derek Groen (ICCS, 2016)

Multiscale Modelling and Simulation, 13th International Workshop. - Derek Groen; Valeria V. Krzhizhanovskaya; Bartosz Bosak; Timothy D. Scheibe; Alfons G. Hoekstra (ICCS, 2016)

FabSim: Facilitating computational research through automation on large-scale and distributed e-infrastructures. - Derek Groen; Agastya Bhati; James J. Suter; James Hetherington; Stefan J. Zasada; Peter V. Coveney (Comput. Phys. Commun., 2016)

A Serious Video Game To Support Decision Making On Refugee Aid Deployment Policy. - Luis Eduardo Pérez Estrada; Derek Groen; Jose Emmanuel Ramirez-Marquez (ICCS, 2017)

Multiscale Modelling and Simulation, 14th International Workshop. - Derek Groen; Bartosz Bosak; Valeria V. Krzhizhanovskaya; Alfons G. Hoekstra; Petros Koumoutsakos (ICCS, 2017)

Towards an automated framework for agent-based simulation of refugee movements. - Diana Suleimenova; David Bell; Derek Groen (WSC, 2017)

Multiscale computing in the exascale era. - Saad Alowayyed; Derek Groen; Peter V. Coveney; Alfons G. Hoekstra (J. Comput. Sci., 2017)

Development of a Multiscale Simulation Approach for Forced Migration. - Derek Groen (ICCS (2), 2018)

A Coupled Food Security and Refugee Movement Model for the South Sudan Conflict. - Christian Vanhille Campos; Diana Suleimenova; Derek Groen (ICCS (5), 2019)

Introducing VECMAtk - Verification, Validation and Uncertainty Quantification for Multiscale and HPC Simulations. - Derek Groen; Robin A. Richardson; David W. Wright 001; Vytautas Jancauskas; Robert Sinclair; Paul Karlshoefer; Maxime Vassaux; Hamid Arabnejad; Tomasz Piontek; Piotr Kopta; Bartosz Bosak; Jalal Lakhlili; et al. (ICCS (4), 2019)

Building Global Research Capacity in Public Health: The Case of a Science Gateway for Physical Activity Lifelong Modelling and Simulation. - Anastasia Anagnostou; Simon J. E. Taylor; Derek Groen; Diana Suleimenova; Nana Anokye; Riccardo Bruno; Roberto Barbera (WSC, 2019)

Hybrid Simulation Development - Is It Just Analytics? - David Bell; Derek Groen; Navonil Mustafee; Jonathan Ozik; Steffen Straßburger (WSC, 2019)

Towards Modelling the Effect of Evolving Violence on Forced Migration. - Derek Groen; David Bell; Hamid Arabnejad; Diana Suleimenova; Simon J. E. Taylor; Anastasia Anagnostou (WSC, 2019)

Community effort endorsing multiscale modelling, multiscale data science and multiscale computing for systems medicine. - Massimiliano Zanin; Ivan Chorbev; Blaz Stres; Egils Stalidzans; Julio Vera; Paolo Tieri; Filippo Castiglione; Derek Groen; Huiru Zheng; Jan Baumbach; Johannes A. Schmid; José Basilio; et al. (Briefings Bioinform., 2019)

Patterns for High Performance Multiscale Computing. - Saad Alowayyed; Tomasz Piontek; James L. Suter; Olivier Hoenen; Derek Groen; Onnie Luk; Bartosz Bosak; Piotr Kopta; Krzysztof Kurowski; Oliver Perks; Keeran Brabazon; Vytautas Jancauskas; et al. (Future Gener. Comput. Syst., 2019)

Towards Accurate Simulation of Global Challenges on Data Centers Infrastructures via Coupling of Models and Data Sources. - Sergiy Gogolenko; Derek Groen; Diana Suleimenova; Imran Mahmood; Marcin Lawenda; Francisco Javier Nieto de Santos; John Hanley; Milana Vuckovic; Mark Kröll; Bernhard C. Geiger; Robert Elsässer; Dennis Hoppe (ICCS (6), 2020)

An Agent-Based Simulation of the Spread of Dengue Fever. - Imran Mahmood; Mishal Jahan; Derek Groen; Aneela Javed; Faisal Shafait (ICCS (3), 2020)

VECMAtk: A Scalable Verification, Validation and Uncertainty Quantification Toolkit for Scientific Simulations. - Derek Groen; Hamid Arabnejad; Vytautas Jancauskas; Wouter Edeling; Fredrik Jansson; Robin A. Richardson; Jalal Lakhlili; Linda van Veen; Bartosz Bosak; Piotr Kopta; D. W. Wright; Nicolas Monnier; et al. (CoRR, 2020)

How Policy Decisions Affect Refugee Journeys in South Sudan: A Study Using Automated Ensemble Simulations. - Diana Suleimenova; Derek Groen (J. Artif. Soc. Soc. Simul., 2020)

Towards a Coupled Migration and Weather Simulation: South Sudan Conflict. - Alireza Jahani; Hamid Arabnejad; Diana Suleimenova; Milana Vuckovic; Imran Mahmood; Derek Groen (ICCS (5), 2021)

P-Flee: An Efficient Parallel Algorithm for Simulating Human Migration. - Petros Anastasiadis; Sergiy Gogolenko; Nikela Papadopoulou; Marcin Lawenda; Hamid Arabnejad; Alireza Jahani; Imran Mahmood; Derek Groen (IPDPS Workshops, 2021)

Tutorial applications for Verification, Validation and Uncertainty Quantification using VECMA toolkit. - Diana Suleimenova; Hamid Arabnejad; Wouter Edeling; David Coster; Onnie O. Luk; Jalal Lakhlili; Vytautas Jancauskas; Michal Kulczewski; Lourens E. Veen; Dongwei Ye; Pavel Zun; Valeria V. Krzhizhanovskaya; et al. (J. Comput. Sci., 2021)

The impact of uncertainty on predictions of the CovidSim epidemiological code. - Wouter Edeling; Hamid Arabnejad; Robert Sinclair; Diana Suleimenova; Krishnakumar Gopalakrishnan; Bartosz Bosak; Derek Groen; Imran Mahmood; Daan Crommelin; Peter V. Coveney (Nat. Comput. Sci., 2021)

An Agent-Based Forced Displacement Simulation: A Case Study of the Tigray Crisis. - Diana Suleimenova; William Low; Derek Groen (ICCS (4), 2022)

Camp Location Selection in Humanitarian Logistics: A Multiobjective Simulation Optimization Approach. - Yani Xue; Miqing Li; Hamid Arabnejad; Diana Suleimenova; Alireza Jahani; Bernhard C. Geiger; Zidong Wang 001; Xiaohui Liu 001; Derek Groen (ICCS (3), 2022)

FACS-CHARM: A Hybrid Agent-Based and Discrete-Event Simulation Approach for Covid-19 Management at Regional Level. - Anastasia Anagnostou; Derek Groen; Simon J. E. Taylor; Diana Suleimenova; Nura Tijjani Abubakar; Arindam Saha; Kate S. Mintram; Maziar Ghorbani; Habiba Daroge; Tasin Islam; Yani Xue; Edward Okine; et al. (WSC, 2022)

FACS: A geospatial agent-based simulator for analysing COVID-19 spread and public health measures on local regions. - Imran Mahmood; Hamid Arabnejad; Diana Suleimenova; Isabel Sassoon; Alaa Marshan; Alan Edwin Serrano-Rico; Panos Louvieris; Anastasia Anagnostou; Simon J. E. Taylor; David Bell; Derek Groen (J. Simulation, 2022)

Markov Aggregation for Speeding Up Agent-Based Movement Simulations. - Bernhard C. Geiger; Alireza Jahani; Hussain Hussain; Derek Groen (AAMAS, 2023)

Towards a Simplified Solution of COVID Spread in Buildings for Use in Coupled Models. - Lucas Heighington; Derek Groen (ICCS (4), 2023)

Developing an Agent-Based Simulation Model to Forecast Flood-Induced Evacuation and Internally Displaced Persons. - Alireza Jahani; Shenene Jess; Derek Groen; Diana Suleimenova; Yani Xue (ICCS (4), 2023)

Impact of geography on the importance of parameters in infectious disease models. - Arindam Saha; Maziar Ghorbani; Diana Suleimenova; Anastasia Anagnostou; Derek Groen (CoRR, 2023)

FabSim3: An automation toolkit for verified simulations using high performance computing. - Derek Groen; Hamid Arabnejad; Diana Suleimenova; Wouter Edeling; Erwan Raffin; Yani Xue; Kevin Bronik; Nicolas Monnier; Peter V. Coveney (Comput. Phys. Commun., 2023)

Facilitating simulation development for global challenge response and anticipation in a timely way. - Derek Groen; Diana Suleimenova; Alireza Jahani; Yani Xue (J. Comput. Sci., 2023)

The computational planet. - Sergey V. Kovalchuk; Clélia de Mulatier; Derek Groen; Maciej Paszynski; Valeria V. Krzhizhanovskaya; Jack J. Dongarra; Peter M. A. Sloot (J. Comput. Sci., 2023)

A Working Week Simulation Approach to Forecast Personal Well-Being. - Derek Groen; Shivank Khullar; Moqi Groen-Xu; Rumyana Neykova (ICCS (3), 2024)

A Conceptual Approach to Agent-Based Modelling of Coping Mechanisms in Climate-Driven Flooding in Bangladesh. - Laura M. Harbach; Derek Groen; Alireza Jahani; Diana Suleimenova; Maziar Ghorbani; Yani Xue (ICCS (5), 2024)

Enhancing Forced Displacement Simulations: Integrating Health Facilities for Automatically Generated Routes Networks. - Alireza Jahani; Maziar Ghorbani; Diana Suleimenova; Yani Xue; Derek Groen (WSC, 2024)

Model Input Verification of Large Scale Simulations. - Rumyana Neykova; Derek Groen (CoRR, 2024)

Flee 3: Flexible agent-based simulation for forced migration. - Maziar Ghorbani; Diana Suleimenova; Alireza Jahani; Arindam Saha; Yani Xue; Kate S. Mintram; Anastasia Anagnostou; Auke Tas; William Low; Simon J. E. Taylor; Derek Groen (J. Comput. Sci., 2024)

Large-Scale Parallelization of Human Migration Simulation. - Derek Groen; Nikela Papadopoulou; Petros Anastasiadis; Marcin Lawenda; Lukasz Szustak; Sergiy Gogolenko; Hamid Arabnejad; Alireza Jahani (IEEE Trans. Comput. Soc. Syst., 2024)

FUMEplot: A Prototype Tool for Automated Visualisation of Uncertainties in Ensemble Modelling Outputs. - Derek Groen; Jon McCullough; Yehor Yudin (ICCS (Workshops 5), 2025)

Reversed Model Verification by Inferring Conceptual Models from Simulation Code. - Rumyana Neykova; Derek Groen (ICCS (4), 2025)

Sensitivity analysis of high-dimensional models with correlated inputs. - Juraj Kardos; Wouter Edeling; Diana Suleimenova; Derek Groen; Olaf Schenk (J. Comput. Sci., 2025)