Pathema: a clade-specific bioinformatics resource center for pathogen research. - Lauren M. Brinkac; Tanja Davidsen; Erin Beck; Anuradha Ganapathy; Elisabet Caler; Robert J. Dodson; A. Scott Durkin; Derek M. Harkins; Hernan Lorenzi; Ramana Madupu; Yinong Sebastian; Susmita Shrivastava; et al. (Nucleic Acids Res., 2010)

The Protein Naming Utility: a rules database for protein nomenclature. - Johannes Goll; Robert Montgomery; Lauren M. Brinkac; Seth A. Schobel; Derek M. Harkins; Yinong Sebastian; Susmita Shrivastava; A. Scott Durkin; Granger G. Sutton (Nucleic Acids Res., 2010)

CharProtDB: a database of experimentally characterized protein annotations. - Ramana Madupu; Alexander R. Richter; Robert J. Dodson; Lauren M. Brinkac; Derek M. Harkins; A. Scott Durkin; Susmita Shrivastava; Granger G. Sutton; Daniel H. Haft (Nucleic Acids Res., 2012)

TIGRFAMs and Genome Properties in 2013. - Daniel H. Haft; Jeremy D. Selengut; Roland A. Richter; Derek M. Harkins; Malay Kumar Basu; Erin Beck (Nucleic Acids Res., 2013)

OMeta: an ontology-based, data-driven metadata tracking system. - Indresh Singh; Mehmet Kuscuoglu; Derek M. Harkins; Granger G. Sutton; Derrick E. Fouts; Karen E. Nelson (BMC Bioinform., 2019)