Automatic Quantification of Microtubule Dynamics. - Stathis Hadjidemetriou; James S. Duncan; Derek Toomre; David Tuck (ISBI, 2004)

Segmentation and 3D Reconstruction of Microtubules in Total Internal Reflection Fluorescence Microscopy (TIRFM). - Stathis Hadjidemetriou; Derek Toomre; James S. Duncan (MICCAI, 2005)

Analysis of spatial dependencies of endocytic proteins based on temporal random sets. - Rafael Sebastián; María Elena Díaz; Guillermo Ayala; Roberto Zoncu; Derek Toomre (EMBC, 2006)

Tracking the motion of the outer tips of microtubules. - Stathis Hadjidemetriou; Derek Toomre; James S. Duncan (ISBI, 2006)

Analysis of Spatially and Temporally Overlapping Events with Application to Image Sequences. - Guillermo Ayala; Rafael Sebastián; María Elena Díaz; Ester Díaz; Roberto Zoncu; Derek Toomre (IEEE Trans. Pattern Anal. Mach. Intell., 2006)

Studying endocytosis in space and time by means of temporal Boolean models. - Rafael Sebastián; Ester Díaz; Guillermo Ayala; María Elena Díaz; Roberto Zoncu; Derek Toomre (Pattern Recognit., 2006)

Spatio-Temporal Analysis of Constitutive Exocytosis in Epithelial Cells. - Rafael Sebastián; María Elena Díaz; Guillermo Ayala; Kresimir Letinic; José Moncho-Bogani; Derek Toomre (IEEE ACM Trans. Comput. Biol. Bioinform., 2006)

Fuzzy Temporal Random Sets with an Application to Cell Biology. - Teresa León; Rafael Sebastián; Guillermo Ayala; María Elena Díaz; Roberto Zoncu; Derek Toomre (FUZZ-IEEE, 2007)

Estimating the Duration of Endocytic Events. - Rafael Sebastián; Guillermo Ayala; María Elena Díaz; Roberto Zoncu; Derek Toomre (ISBI, 2007)

Analyzing Protein-Protein Spatial-Temporal Dependencies from Image Sequences Using Fuzzy Temporal Random Sets. - María Elena Díaz; Guillermo Ayala; Teresa León; Roberto Zoncu; Derek Toomre (J. Comput. Biol., 2008)

Motion tracking of the outer tips of microtubules. - Stathis Hadjidemetriou; Derek Toomre; James S. Duncan (Medical Image Anal., 2008)

Measuring Spatiotemporal Dependencies in Bivariate Temporal Random Sets with Applications to Cell Biology. - Ester Díaz; Rafael Sebastián; Guillermo Ayala; María Elena Díaz; Roberto Zoncu; Derek Toomre; Stéphane Gasman (IEEE Trans. Pattern Anal. Mach. Intell., 2008)

3-D reconstruction and measurement of microtubules from multiple angle-total internal reflection fluorescence microscopy. - Qian Yang; Alexander Karpikov; Derek Toomre; James S. Duncan (CVPR Workshops, 2009)

Estimation of 3D Geometry of Microtubules Using Multi-angle Total Internal Reflection Fluorescence Microscopy. - Qian Yang; Alexander Karpikov; Derek Toomre; James S. Duncan (MICCAI (2), 2010)

Deciphering subcellular processes in live imaging datasets via dynamic probabilistic networks. - Kresimir Letinic; Rafael Sebastián; Andrew Barthel; Derek Toomre (Bioinform., 2010)

Automatic Detection of Large Dense-Core Vesicles in Secretory Cells and Statistical Analysis of Their Intracellular Distribution. - Ester Díaz; Guillermo Ayala; Maria Diaz-Fernandez; Liang Gong; Derek Toomre (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

An Expectation Maximization Based Method for Subcellular Particle Tracking Using Multi-angle TIRF Microscopy. - Liang Liang; Hongying Shen; Pietro De Camilli; Derek Toomre; James S. Duncan (MICCAI (1), 2011)

3-D Reconstruction of Microtubules From Multi-Angle Total Internal Reflection Fluorescence Microscopy Using Bayesian Framework. - Qian Yang; Alexander Karpikov; Derek Toomre; James S. Duncan (IEEE Trans. Image Process., 2011)

A Bayesian method for 3D estimation of subcellular particle features in multi-angle TIRF microscopy. - Liang Liang; Hongying Shen; Yingke Xu; Pietro De Camilli; Derek Toomre; James S. Duncan (ISBI, 2012)

Automatic detection of subcellular particles in fluorescence microscopy via feature clustering and bayesian analysis. - Liang Liang; Yingke Xu; Hongying Shen; Pietro De Camilli; Derek K. Toomre; James S. Duncan (MMBIA, 2012)