PyRAD: assembly of de novo RADseq loci for phylogenetic analyses. - Deren A. R. Eaton (Bioinform., 2014)

ipyrad: Interactive assembly and analysis of RADseq datasets. - Deren A. R. Eaton; Isaac Overcast (Bioinform., 2020)

ipcoal: an interactive Python package for simulating and analyzing genealogies and sequences on a species tree or network. - Patrick F. McKenzie; Deren A. R. Eaton (Bioinform., 2020)