Data extraction module - A supplementary tool for the AMMOS_ProtLig software package. - Dessislava Jereva; Ilza Pajeva; Tania Pencheva (Comput. Math. Appl., 2012)

Molecular dynamics simulation of the human estrogen receptor alpha: contribution to the pharmacophore of the agonists. - Dessislava Jereva; Filip Fratev; Ivanka Tsakovska; Petko Alov; Tania Pencheva; Ilza Pajeva (Math. Comput. Simul., 2017)

AMMOS2: a web server for protein-ligand-water complexes refinement via molecular mechanics. - Céline M. Labbé; Tania Pencheva; Dessislava Jereva; Dimitri Desvillechabrol; Jérôme Bécot; Bruno O. Villoutreix; Ilza Pajeva; Maria A. Miteva (Nucleic Acids Res., 2017)

InterCriteria Analysis Implementation for Exploration of the Performance of Various Docking Scoring Functions. - Ivanka Tsakovska; Petko Alov; Nikolay Ikonomov; Vassia Atanassova; Peter Vassilev; Olympia Roeva; Dessislava Jereva; Krassimir T. Atanassov; Ilza Pajeva; Tania Pencheva (HPC, 2019)

InterCriteria Analysis Approach for Decision-Making in Virtual Screening: Comparative Study of Various Scoring Functions. - Dessislava Jereva; Maria Angelova; Ivanka Tsakovska; Petko Alov; Ilza Pajeva; Maria A. Miteva; Tania Pencheva (BioInfoMed, 2020)