QAlign: aligning nanopore reads accurately using current-level modeling. - Dhaivat Joshi; Shunfu Mao; Sreeram Kannan; Suhas N. Diggavi (Bioinform., 2021)

HQAlign: aligning nanopore reads for SV detection using current-level modeling. - Dhaivat Joshi; Suhas N. Diggavi; Mark J. P. Chaisson; Sreeram Kannan (Bioinform., 2023)