The eukaryotic Pso2p/Snm1p family revisited: In Silico analyses of Pso2p A, B and Plasmodium groups. - Diego Bonatto; Martin Brendel; João Antonio Pêgas Henriques (Comput. Biol. Chem., 2005)

In silico analyses of a new group of fungal and plant RecQ4-homologous proteins. - Fernanda Barea; Simone Tessaro; Diego Bonatto (Comput. Biol. Chem., 2008)

Dis2PPI: A Workflow Designed to Integrate Proteomic and Genetic Disease Data. - Daniel Luis Notari; Samuel Brando Oldra; Mauricio Adami Mariani; Cristian Reolon; Diego Bonatto (Int. J. Knowl. Discov. Bioinform., 2012)

Systems biology approach reveals possible evolutionarily conserved moonlighting functions for enolase. - Gabriela Prado Paludo; Karina Rodrigues Lorenzatto; Diego Bonatto; Henrique Bunselmeyer Ferreira (Comput. Biol. Chem., 2015)

A new classification system of beer categories and styles based on large-scale data mining and self-organizing maps of beer recipes. - Diego Bonatto (CoRR, 2025)