Assembling Omnitigs using Hidden-Order de Bruijn Graphs. - Diego Díaz-Domínguez; Djamal Belazzougui; Travis Gagie; Veli Mäkinen; Gonzalo Navarro 001; Simon J. Puglisi (CoRR, 2018)

Simulating the DNA Overlap Graph in Succinct Space. - Diego Díaz-Domínguez; Travis Gagie; Gonzalo Navarro 001 (CPM, 2019)

An Index for Sequencing Reads Based on the Colored de Bruijn Graph. - Diego Díaz-Domínguez (SPIRE, 2019)

Simulating the DNA String Graph in Succinct Space. - Diego Díaz-Domínguez; Travis Gagie; Gonzalo Navarro 001 (CoRR, 2019)

A grammar compressor for collections of reads with applications to the construction of the BWT. - Diego Díaz-Domínguez; Gonzalo Navarro 001 (DCC, 2021)

An LMS-Based Grammar Self-index with Local Consistency Properties. - Diego Díaz-Domínguez; Gonzalo Navarro 001; Alejandro Pacheco (SPIRE, 2021)

Efficient construction of the extended BWT from grammar-compressed DNA sequencing reads. - Diego Díaz-Domínguez; Gonzalo Navarro 001 (CoRR, 2021)

Computing All-vs-All MEMs in Run-Length-Encoded Collections of HiFi Reads. - Diego Díaz-Domínguez; Simon J. Puglisi; Leena Salmela (SPIRE, 2022)

Computing All-vs-All MEMs in Grammar-Compressed Text. - Diego Díaz-Domínguez; Leena Salmela (SPIRE, 2023)

Simple Runs-Bounded FM-Index Designs Are Fast. - Diego Díaz-Domínguez; Saska Dönges; Simon J. Puglisi; Leena Salmela (SEA, 2023)

Efficient construction of the BWT for repetitive text using string compression. - Diego Díaz-Domínguez; Gonzalo Navarro 001 (Inf. Comput., 2023)

Space-efficient computation of k-mer dictionaries for large values of k. - Diego Díaz-Domínguez; Miika Leinonen; Leena Salmela (Algorithms Mol. Biol., 2024)

Algorithms for Computing Very Large BWTs: a Short Survey. - Diego Díaz-Domínguez; Lavinia Egidi; Veronica Guerrini; Felipe A. Louza; Giovanna Rosone (The Expanding World of Compressed Data, 2025)

Efficient Terabyte-Scale Text Compression via Stable Local Consistency and Parallel Grammar Processing. - Diego Díaz-Domínguez (SEA, 2025)

Prefix-free parsing for merging big BWTs. - Diego Díaz-Domínguez; Travis Gagie; Veronica Guerrini; Ben Langmead; Zsuzsanna Lipták; Giovanni Manzini; Francesco Masillo; Vikram Shivakumar (CoRR, 2025)