A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation. - Diep Thi Hoang; Le Sy Vinh; Tomás Flouri; Alexandros Stamatakis; Arndt von Haeseler; Bui Quang Minh (KSE, 2016)

pQMaker: empirically estimating amino acid substitution models in a parallel environment. - Nguyen Duc Canh; Cuong Cao Dang; Le Sy Vinh; Bui Quang Minh; Diep Thi Hoang (KSE, 2020)

A distributed algorithm for the parsimony bootstrap approximation. - Nghia Pham; Diep Thi Hoang (KSE, 2021)

Employing tree bisection and reconnection rearrangement for parsimony inference in MPBoot. - Tien Dung Huynh; Quoc Tuan Vu; Viet Dung Nguyen; Diep Thi Hoang (KSE, 2022)

Enhancing CRISPR-Cas9 On-Target Activity Prediction Employing Catboost Machine Learning Models. - Kien Trung Hoang; Chi Kim Hoang; Diep Thi Hoang (KSE, 2024)

pQMaker2: An Improved Distributed Approach for Empirically Estimating Reversible Amino Acid Substitution Models. - Hoang Vu Huy; Quan Nguyen Dang; Thanh Nguyen Chi; Diep Thi Hoang (KSE, 2024)

Multi-Omics Biomarker Discovery with Explainable Artificial Intelligence: A Case Study in Glioblastoma. - Hoang Le; Hien Nguyen Minh; Ha Tang Vinh; Diep Thi Hoang (KSE, 2024)