Small RNAs in angiosperms: sequence characteristics, distribution and generation. - Dijun Chen; Yijun Meng; Xiaoxia Ma; Chuanzao Mao; Youhuang Bai; Junjie Cao 002; Haibin Gu; Ping Wu; Ming Chen 005 (Bioinform., 2010)

Functional characterization of plant small RNAs based on next-generation sequencing data. - Ming Chen 005; Yijun Meng; Haibin Gu; Dijun Chen (Comput. Biol. Chem., 2010)

MyBioNet: interactively visualize, edit and merge biological networks on the Web. - Donglin Huang; Yiling Huang; Youhuang Bai; Dijun Chen; Ralf Hofestädt; Christian Klukas; Ming Chen 005 (Bioinform., 2011)

PmiRKB: a plant microRNA knowledge base. - Yijun Meng; Lingfeng Gou; Dijun Chen; Chuanzao Mao; Yongfeng Jin; Ping Wu; Ming Chen 005 (Nucleic Acids Res., 2011)

PlantNATsDB: a comprehensive database of plant natural antisense transcripts. - Dijun Chen; Chunhui Yuan; Jian Zhang; Zhao Zhang 012; Lin Bai; Yijun Meng; Ling-Ling Chen; Ming Chen 005 (Nucleic Acids Res., 2012)

Bridging Genomics and Phenomics. - Dijun Chen; Ming Chen 005; Thomas Altmann; Christian Klukas (Approaches in Integrative Bioinformatics, 2014)

A practical guide for DNase-seq data analysis: from data management to common applications. - Yongjing Liu; Liangyu Fu; Kerstin Kaufmann; Dijun Chen; Ming Chen 005 (Briefings Bioinform., 2019)

A Linearly Polarized Wavelength-Tunable Q-Switched Fiber Laser with a Narrow Spectral Bandwidth of 112 MHz. - Chengjie Zhu; Xuezong Yang; Yuxuan Liu; Muye Li; Yuxiang Sun; Wei You; Peng Dong; Dijun Chen; Yan Feng; Weibiao Chen (Sensors, 2023)

An Investigation of All Fiber Free-Running Dual-Comb Spectroscopy. - Fu Yang; Yanyu Lu; Guibin Liu; Shaowei Huang; Dijun Chen; Kang Ying; Weiao Qi; Jiaqi Zhou 011 (Sensors, 2023)

TripletCell: a deep metric learning framework for accurate annotation of cell types at the single-cell level. - Yan Liu 038; Guo Wei; Chen Li 021; Long-Chen Shen; Robin B. Gasser; Jiangning Song; Dijun Chen; Dong-Jun Yu (Briefings Bioinform., 2023)

scPlantLLM: A Foundation Model for Exploring Single-cell Expression Atlases in Plants. - Guangshuo Cao; Haoyu Chao; Wenqi Zheng; Yangming Lan; Kaiyan Lu; Yueyi Wang; Ming Chen; He Zhang; Dijun Chen (Genom. Proteom. Bioinform., 2025)