Molecular Modelling Study of the 3D Structure of the Bovine Viral Diarrhea Virus (BVDV) Helicase. - Andrea Brancale; Chrisanthy Vlachaki; Dimitrios Vlachakis (Silico Biol., 2008)

3D Molecular Modelling of the Helicase Enzyme of the Endemic, Zoonotic Greek Goat Encephalitis Virus. - Dimitrios Vlachakis; Georgia Tsiliki; Sophia Kossida (EANN (1), 2013)

State-of-the-art technology in modern computer-aided drug design. - Georgios A. Dalkas; Dimitrios Vlachakis; Dimosthenis Tsagkrasoulis; Anastasia N. Kastania; Sophia Kossida (Briefings Bioinform., 2013)

Introducing Drugster: a comprehensive and fully integrated drug design, lead and structure optimization toolkit. - Dimitrios Vlachakis; Dimosthenis Tsagkrasoulis; Vasileios Megalooikonomou; Sophia Kossida (Bioinform., 2013)

Antibody Drug Conjugate Bioinformatics: Drug Delivery through the Letterbox. - Dimitrios Vlachakis; Sophia Kossida (Comput. Math. Methods Medicine, 2013)

Space Constrained Homology Modelling: The Paradigm of the RNA-Dependent RNA Polymerase of Dengue (Type II) Virus. - Dimitrios Vlachakis; Dimitrios-Georgios Kontopoulos; Sophia Kossida (Comput. Math. Methods Medicine, 2013)

ASSP; the Antibody Secondary Structure Profile search tool. - Dimitrios Vlachakis; Alexandros Armaos; Ioannis Kasampalidis; Arianna Filntisi; Sophia Kossida (ICABD, 2014)

A Machine Learning Methodology for Enzyme Functional Classification Combining Structural and Protein Sequence Descriptors. - Afshine Amidi; Shervine Amidi; Dimitrios Vlachakis; Nikos Paragios; Evangelia I. Zacharaki (IWBBIO, 2016)

A novel approach to finger vein authentication. - Fotios Tagkalakis; Dimitrios Vlachakis; Vasileios Megalooikonomou; Athanassios Skodras (ISBI, 2017)

EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation. - Afshine Amidi; Shervine Amidi; Dimitrios Vlachakis; Vasileios Megalooikonomou; Nikos Paragios; Evangelia I. Zacharaki (CoRR, 2017)

Advanced Protein Alignments Based on Sequence, Structure and Hydropathy Profiles; The Paradigm of the Viral Polymerase Enzyme. - Dimitrios Vlachakis; Alexandros Armaos; Sophia Kossida (Math. Comput. Sci., 2017)

Complexity in Medical Informatics. - Panagiotis Vlamos; Ilias S. Kotsireas; Dimitrios Vlachakis (Complex., 2019)

Introducing Drugonfly; A Novel Computer-Aided Drug Repurposing Pipeline Based on Genomic, Structural and Physicochemical Profiles. - Dimitrios Vlachakis (BFAL, 2020)

Mathematical Multidimensional Modelling and Structural Artificial Intelligence Pipelines Provide Insights for the Designing of Highly Specific AntiSARS-CoV2 Agents. - Dimitrios Vlachakis; Panayiotis M. Vlamos (Math. Comput. Sci., 2021)

Implementation of a decision support system for prediction of the total soluble solids of industrial tomato using machine learning models. - Christoforos-Nikitas Kasimatis; Evangelos Psomakelis; Nikolaos Katsenios; Giannis Katsenios; Marilena Papatheodorou; Dimitrios Vlachakis; Dimitris Apostolou; Aspasia Efthimiadou (Comput. Electron. Agric., 2022)

Maximal degenerate palindromes with gaps and mismatches. - Mai Alzamel; Christopher Hampson; Costas S. Iliopoulos; Zara Lim; Solon P. Pissis; Dimitrios Vlachakis; Steven Watts (Theor. Comput. Sci., 2023)