Cross-Language Access to Recorded Speech in the MALACH Project. - Douglas W. Oard; Dina Demner-Fushman; Jan Hajic; Bhuvana Ramabhadran; Samuel Gustman; William J. Byrne; Dagobert Soergel; Bonnie J. Dorr; Philip Resnik; Michael Picheny (TSD, 2002)

Correcting OCR text by association with historical datasets. - Susan E. Hauser; Jonathan Schlaifer; Tehseen F. Sabir; Dina Demner-Fushman; Scott Straughan; George R. Thoma (DRR, 2003)

The Effect of Bilingual Term List Size on Dictionary-Based Cross-Language Information Retrieval. - Dina Demner-Fushman; Douglas W. Oard (HICSS, 2003)

HARD Experiment at Maryland: From Need Negotiation to Automated HARD Process. - Daqing He; Dina Demner-Fushman (TREC, 2003)

Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics. - Mehmet Kayaalp 002; Alan R. Aronson; Susanne M. Humphrey; Nicholas C. Ide; Lorraine K. Tanabe; Lawrence H. Smith; Dina Demner-Fushman; Russell F. Loane; James G. Mork; Olivier Bodenreider (TREC, 2003)

Making MIRACLEs: Interactive translingual search for Cebuano and Hindi. - Daqing He; Douglas W. Oard; Jianqiang Wang 002; Jun Luo; Dina Demner-Fushman; Kareem Darwish; Philip Resnik; Sanjeev Khudanpur; Michael Nossal; Michael Subotin; Anton Leuski (ACM Trans. Asian Lang. Inf. Process., 2003)

A Testbed System for Mobile Point-of-Care Information Delivery. - Susan E. Hauser; Dina Demner-Fushman; Glenn Ford; George R. Thoma (CBMS, 2004)

A Usability Study of the PubMed on Tap User Interface for PDAs. - Gregory L. Alexander; Susan E. Hauser; Karen Steely; Glenn Ford; Dina Demner-Fushman (MedInfo, 2004)

Organizing Literature Information for Clinical Decision Support. - Dina Demner-Fushman; Susan E. Hauser; Glenn Ford; George R. Thoma (MedInfo, 2004)

PubMed on Tap: Discovering Design Principles for Online Information Delivery to Handheld Computers. - Susan E. Hauser; Dina Demner-Fushman; Glenn Ford; George R. Thoma (MedInfo, 2004)

Knowledge-Intensive and Statistical Approaches to the Retrieval and Annotation of Genomics MEDLINE Citations. - Alan R. Aronson; Susanne M. Humphrey; Nicholas C. Ide; Won Kim 003; Russell F. Loane; James G. Mork; Lawrence H. Smith; Lorraine K. Tanabe; W. John Wilbur; Natalie Xie; Dina Demner-Fushman; Hongfang Liu (TREC, 2004)

Improving Passage Retrieval Using Interactive Elicition and Statistical Modeling. - Daqing He; Dina Demner-Fushman; Douglas W. Oard; Damianos G. Karakos; Sanjeev Khudanpur (TREC, 2004)

Evaluating Summaries and Answers: Two Sides of the Same Coin? - Jimmy Lin; Dina Demner-Fushman (IEEvaluation@ACL, 2005)

The Role of Title, Metadata and Abstract in Identifying Clinically Relevant Journal Articles. - Dina Demner-Fushman; Susan E. Hauser; George R. Thoma (AMIA, 2005)

"Bag of Words" is not enough for Strength of Evidence Classification. - Jimmy Lin; Dina Demner-Fushman (AMIA, 2005)

Semantic characteristics of MEDLINE citations useful for therapeutic decision-making. - Charles Sneiderman; Dina Demner-Fushman; Marcelo Fiszman; Thomas C. Rindflesch (AMIA, 2005)

Automatically Evaluating Answers to Definition Questions. - Jimmy Lin; Dina Demner-Fushman (HLT/EMNLP, 2005)

Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving and Annotating Textual Genomics Documents. - Alan R. Aronson; Dina Demner-Fushman; Susanne M. Humphrey; Jimmy Lin; Patrick Ruch; Miguel E. Ruiz; Lawrence H. Smith; Lorraine K. Tanabe; W. John Wilbur; Hongfang Liu (TREC, 2005)

A Menagerie of Tracks at Maryland: HARD, Enterprise, QA, and Genomics, Oh My! - Jimmy Lin; Eileen G. Abels; Dina Demner-Fushman; Douglas W. Oard; Philip Fei Wu; Yejun Wu (TREC, 2005)

Answer Extraction, Semantic Clustering, and Extractive Summarization for Clinical Question Answering. - Dina Demner-Fushman; Jimmy Lin (ACL, 2006)

MEDLINE as a Source of Just-in-Time Answers to Clinical Questions. - Dina Demner-Fushman; Susan E. Hauser; Susanne M. Humphrey; Glenn Ford; Joshua L. Jacobs; George R. Thoma (AMIA, 2006)

Preliminary Comparison of Three Search Engines for Point of Care Access to MEDLINE® Citations. - Susan E. Hauser; Dina Demner-Fushman; Glenn Ford; Joshua L. Jacobs; George R. Thoma (AMIA, 2006)

Evaluation of PICO as a Knowledge Representation for Clinical Questions. - Xiaoli Huang; Jimmy Lin; Dina Demner-Fushman (AMIA, 2006)

Semantic Processing to Enhance Retrieval of Diagnosis Citations from Medline. - Charles Sneiderman; Dina Demner-Fushman; Marcelo Fiszman; Graciela Rosemblat; François-Michel Lang; Daphne Norwood; Thomas C. Rindflesch (AMIA, 2006)

Generative Content Models for Structural Analysis of Medical Abstracts. - Jimmy Lin; Damianos G. Karakos; Dina Demner-Fushman; Sanjeev Khudanpur (BioNLP@NAACL-HLT, 2006)

Will Pyramids Built of Nuggets Topple Over?. - Jimmy Lin; Dina Demner-Fushman (HLT-NAACL, 2006)

The role of knowledge in conceptual retrieval: a study in the domain of clinical medicine. - Jimmy Lin; Dina Demner-Fushman (SIGIR, 2006)

Exploring the limits of single-iteration clarification dialogs. - Jimmy Lin; Philip Fei Wu; Dina Demner-Fushman; Eileen G. Abels (SIGIR, 2006)

Finding Relevant Passages in Scientific Articles: Fusion of Automatic Approaches vs. an Interactive Team Effort. - Dina Demner-Fushman; Susanne M. Humphrey; Nicholas C. Ide; Russell F. Loane; Patrick Ruch; Miguel E. Ruiz; Lawrence H. Smith; Lorraine K. Tanabe; W. John Wilbur; Alan R. Aronson (TREC, 2006)

Methods for automatically evaluating answers to complex questions. - Jimmy Lin; Dina Demner-Fushman (Inf. Retr., 2006)

Research Paper: Automatically Identifying Health Outcome Information in MEDLINE Records. - Dina Demner-Fushman; Barbara Few; Susan E. Hauser; George R. Thoma (J. Am. Medical Informatics Assoc., 2006)

Word sense disambiguation by selecting the best semantic type based on Journal Descriptor Indexing: Preliminary experiment. - Susanne M. Humphrey; Willie J. Rogers; Halil Kilicoglu; Dina Demner-Fushman; Thomas C. Rindflesch (J. Assoc. Inf. Sci. Technol., 2006)

Complex Question Answering based on a Semantic Domain Model of Clinical Medicine. - Dina Demner-Fushman (2006)

Semantic Clustering of Answers to Clinical Questions. - Jimmy Lin; Dina Demner-Fushman (AMIA, 2007)

From indexing the biomedical literature to coding clinical text: experience with MTI and machine learning approaches. - Alan R. Aronson; Olivier Bodenreider; Dina Demner-Fushman; Kin Wah Fung; Vivian K. Lee; James G. Mork; Aurélie Névéol; Lee B. Peters; Willie J. Rogers (BioNLP@ACL, 2007)

Interpreting comparative constructions in biomedical text. - Marcelo Fiszman; Dina Demner-Fushman; François-Michel Lang; Philip Goetz; Thomas C. Rindflesch (BioNLP@ACL, 2007)

Automatically Finding Images for Clinical Decision Support. - Dina Demner-Fushman; Sameer K. Antani; Mohammad-Reza Siadat; Hamid Soltanian-Zadeh; Farshad Fotouhi; Kost V. Elisevich (ICDM Workshops, 2007)

Extracting Semantic Predications from Medline Citations for Pharmacogenomics. - Caroline B. Ahlers; Marcelo Fiszman; Dina Demner-Fushman; François-Michel Lang; Thomas C. Rindflesch (Pacific Symposium on Biocomputing, 2007)

Session Introduction. - Pierre Zweigenbaum; Dina Demner-Fushman; Hong Yu 001; K. Bretonnel Cohen (Pacific Symposium on Biocomputing, 2007)

Combining Resources to Find Answers to Biomedical Questions. - Dina Demner-Fushman; Susanne M. Humphrey; Nicholas C. Ide; Russell F. Loane; James G. Mork; Patrick Ruch; Miguel E. Ruiz; Lawrence H. Smith; W. John Wilbur; Alan R. Aronson (TREC, 2007)

Frontiers of biomedical text mining: current progress. - Pierre Zweigenbaum; Dina Demner-Fushman; Hong Yu 001; Kevin Bretonnel Cohen (Briefings Bioinform., 2007)

Answering Clinical Questions with Knowledge-Based and Statistical Techniques. - Dina Demner-Fushman; Jimmy Lin (Comput. Linguistics, 2007)

Research Paper: Using Wireless Handheld Computers to Seek Information at the Point of Care: An Evaluation by Clinicians. - Susan E. Hauser; Dina Demner-Fushman; Joshua L. Jacobs; Susanne M. Humphrey; Glenn Ford; George R. Thoma (J. Am. Medical Informatics Assoc., 2007)

Application of Information Technology: Essie: A Concept-based Search Engine for Structured Biomedical Text. - Nicholas C. Ide; Russell F. Loane; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2007)

Research Paper: Knowledge-based Methods to Help Clinicians Find Answers in MEDLINE. - Charles Sneiderman; Dina Demner-Fushman; Marcelo Fiszman; Nicholas C. Ide; Thomas C. Rindflesch (J. Am. Medical Informatics Assoc., 2007)

Adapting Naturally Occurring Test Suites for Evaluation of Clinical Question Answering. - Dina Demner-Fushman (SETQALNLP, 2008)

Methodology for Creating UMLS Content Views Appropriate for Biomedical Natural Language Processing. - Alan R. Aronson; James G. Mork; Aurélie Névéol; Sonya E. Shooshan; Dina Demner-Fushman (AMIA, 2008)

A Prototype System to Support Evidence-based Practice. - Dina Demner-Fushman; Charlotte A. Seckman; Cheryl Fisher; Susan E. Hauser; Jennifer Clayton; George R. Thoma (AMIA, 2008)

Toward Automatic Recognition of High Quality Clinical Evidence. - Halil Kilicoglu; Dina Demner-Fushman; Thomas C. Rindflesch; Nancy L. Wilczynski; R. Brian Haynes (AMIA, 2008)

Exploring use of images in clinical articles for decision support in evidence-based medicine. - Sameer K. Antani; Dina Demner-Fushman; Jiang Li; Balaji Vasan Srinivasan; George R. Thoma (DRR, 2008)

Themes in biomedical natural language processing: BioNLP08. - Dina Demner-Fushman; Sophia Ananiadou; K. Bretonnel Cohen; John Pestian; Jun'ichi Tsujii; Bonnie L. Webber (BMC Bioinform., 2008)

Text- and Content-based Approaches to Image Retrieval for the ImageCLEF 2009 Medical Retrieval Track. - Matthew S. Simpson; Md. Mahmudur Rahman; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (CLEF (Working Notes), 2009)

Figure content analysis for improved biomedical article retrieval. - Daekeun You; Emilia Apostolova; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (DRR, 2009)

Using Non-Lexical Features to Identify Effective Indexing Terms for Biomedical Illustrations. - Matthew S. Simpson; Dina Demner-Fushman; Charles Sneiderman; Sameer K. Antani; George R. Thoma (EACL, 2009)

Multi-modal Query Expansion Based on Local Analysis for Medical Image Retrieval. - Md. Mahmudur Rahman; Sameer K. Antani; L. Rodney Long; Dina Demner-Fushman; George R. Thoma (MCBR-CDS, 2009)

Towards Automatic Image Region Annotation - Image Region Textual Coreference Resolution. - Emilia Apostolova; Dina Demner-Fushman (HLT-NAACL (Short Papers), 2009)

The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers. - Casey Lynnette Overby; Peter Tarczy-Hornoch; Dina Demner-Fushman (BMC Bioinform., 2009)

Annotation and retrieval of clinically relevant images. - Dina Demner-Fushman; Sameer K. Antani; Matthew S. Simpson; George R. Thoma (Int. J. Medical Informatics, 2009)

Viewpoint Paper: Towards Automatic Recognition of Scientifically Rigorous Clinical Research Evidence. - Halil Kilicoglu; Dina Demner-Fushman; Thomas C. Rindflesch; Nancy L. Wilczynski; R. Brian Haynes (J. Am. Medical Informatics Assoc., 2009)

What can natural language processing do for clinical decision support? - Dina Demner-Fushman; Wendy Webber Chapman; Clement J. McDonald (J. Biomed. Informatics, 2009)

Automatic summarization of MEDLINE citations for evidence-based medical treatment: A topic-oriented evaluation. - Marcelo Fiszman; Dina Demner-Fushman; Halil Kilicoglu; Thomas C. Rindflesch (J. Biomed. Informatics, 2009)

Text- and Content-based Approaches to Image Modality Detection and Retrieval for the ImageCLEF 2010 Medical Retrieval Track. - Matthew S. Simpson; Md. Mahmudur Rahman; Sachin Singhal; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (CLEF (Notebook Papers/LABs/Workshops), 2010)

Biomedical article retrieval using multimodal features and image annotations in region-based CBIR. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; Md. Mahmudur Rahman; Venu Govindaraju; George R. Thoma (DRR, 2010)

Towards Automating the Initial Screening Phase of a Systematic Review. - Tanja Bekhuis; Dina Demner-Fushman (MedInfo, 2010)

Identifying contextual information in clinical texts: a study of two domains. - Emilia Apostolova; Noriko Tomuro; Dina Demner-Fushman (Semantic Mining in Biomedicine, 2010)

Extracting Rx information from clinical narrative. - James G. Mork; Olivier Bodenreider; Dina Demner-Fushman; Rezarta Islamaj Dogan; François-Michel Lang; Zhiyong Lu; Aurélie Névéol; Lee B. Peters; Sonya E. Shooshan; Alan R. Aronson (J. Am. Medical Informatics Assoc., 2010)

UMLS content views appropriate for NLP processing of the biomedical literature vs. clinical text. - Dina Demner-Fushman; James G. Mork; Sonya E. Shooshan; Alan R. Aronson (J. Biomed. Informatics, 2010)

Interactive publication: The document as a research tool. - George R. Thoma; Glenn Ford; Sameer K. Antani; Dina Demner-Fushman; Michael Chung; Matthew S. Simpson (J. Web Semant., 2010)

Automatic Extraction of Lexico-Syntactic Patterns for Detection of Negation and Speculation Scopes. - Emilia Apostolova; Noriko Tomuro; Dina Demner-Fushman (ACL (2), 2011)

Text and Content-based Approaches to Image Modality Classification and Retrieval for the ImageCLEF 2011 Medical Retrieval Track. - Matthew S. Simpson; Md. Mahmudur Rahman; Srinivas Phadnis; Emilia Apostolova; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (CLEF (Notebook Papers/Labs/Workshop), 2011)

Automatic identification of ROI in figure images toward improving hybrid (text and image) biomedical document retrieval. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; Md. Mahmudur Rahman; Venu Govindaraju; George R. Thoma (DRR, 2011)

Detecting Figure-Panel Labels in Medical Journal Articles Using MRF. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; Venu Govindaraju; George R. Thoma (ICDAR, 2011)

Biomedical Image Retrieval Using Multimodal Context and Concept Feature Spaces. - Md. Mahmudur Rahman; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (MCBR-CDS, 2011)

A Knowledge-Based Approach to Medical Records Retrieval. - Dina Demner-Fushman; Swapna Abhyankar; Antonio Jimeno-Yepes; Russell F. Loane; Bastien Rance; François-Michel Lang; Nicholas C. Ide; Emilia Apostolova; Alan R. Aronson (TREC, 2011)

An image feature-based approach to automatically find images for application to clinical decision support. - Ronald Joe Stanley; Soumya De; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (Comput. Medical Imaging Graph., 2011)

Biomedical Text Mining: A Survey of Recent Progress. - Matthew S. Simpson; Dina Demner-Fushman (Mining Text Data, 2012)

Research Designs in Mesh and Emtree: A Comparative Study of Coverage. - Tanja Bekhuis; Dina Demner-Fushman; Rebecca S. Crowley (AMIA, 2012)

Towards the Creation of a Visual Ontology of Biomedical Imaging Entities. - Matthew S. Simpson; Daekeun You; Md. Mahmudur Rahman; Sameer K. Antani; George R. Thoma; Dina Demner-Fushman (AMIA, 2012)

Window Classification of Brain CT Images in Biomedical Articles. - Zhiyun Xue; Sameer K. Antani; L. Rodney Long; Dina Demner-Fushman; George R. Thoma (AMIA, 2012)

Domain Adaptation of Coreference Resolution for Radiology Reports. - Emilia Apostolova; Noriko Tomuro; Pattanasak Mongkolwat; Dina Demner-Fushman (BioNLP@HLT-NAACL, 2012)

Overview of the ImageCLEF 2012 Medical Image Retrieval and Classification Tasks. - Henning Müller; Alba Garcia Seco de Herrera; Jayashree Kalpathy-Cramer; Dina Demner-Fushman; Sameer K. Antani; Ivan Eggel (CLEF (Online Working Notes/Labs/Workshop), 2012)

ITI's Participation in the ImageCLEF 2012 Medical Retrieval and Classification Tasks. - Matthew S. Simpson; Daekeun You; Md. Mahmudur Rahman; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (CLEF (Online Working Notes/Labs/Workshop), 2012)

Syntactic-Semantic Frames for Clinical Cohort Identification Queries. - Dina Demner-Fushman; Swapna Abhyankar (DILS, 2012)

An Interactive Image Retrieval Framework for Biomedical Articles Based on Visual Region-of- Interest (ROI) Identification and Classification. - Md. Mahmudur Rahman; Daekeun You; Matthew S. Simpson; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (HISB, 2012)

MEDLINE MeSH indexing: lessons learned from machine learning and future directions. - Antonio Jimeno-Yepes; James G. Mork; Bartlomiej Wilkowski; Dina Demner-Fushman; Alan R. Aronson (IHI, 2012)

NLM at TREC 2012 Medical Records Track. - Dina Demner-Fushman; Swapna Abhyankar; Antonio Jimeno-Yepes; Russell F. Loane; François-Michel Lang; James G. Mork; Nicolas Ide; Alan R. Aronson (TREC, 2012)

Screening nonrandomized studies for medical systematic reviews: A comparative study of classifiers. - Tanja Bekhuis; Dina Demner-Fushman (Artif. Intell. Medicine, 2012)

Standardizing clinical laboratory data for secondary use. - Swapna Abhyankar; Dina Demner-Fushman; Clement J. McDonald (J. Biomed. Informatics, 2012)

A mutation-centric approach to identifying pharmacogenomic relations in text. - Bastien Rance; Emily Doughty; Dina Demner-Fushman; Maricel G. Kann; Olivier Bodenreider (J. Biomed. Informatics, 2012)

Design and Development of a Multimodal Biomedical Information Retrieval System. - Dina Demner-Fushman; Sameer K. Antani; Matthew S. Simpson; George R. Thoma (J. Comput. Sci. Eng., 2012)

A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection Based on Meta-Learning. - Antonio Jimeno-Yepes; James G. Mork; Dina Demner-Fushman; Alan R. Aronson (J. Comput. Sci. Eng., 2012)

A simple method to extract key maternal data from neonatal clinical notes. - Swapna Abhyankar; Dina Demner-Fushman (AMIA, 2013)

Mining MEDLINE for problems associated with vitamin D. - Dina Demner-Fushman; James G. Mork; Alan R. Aronson (AMIA, 2013)

Comparison and combination of several MeSH indexing approaches. - Antonio Jimeno-Yepes; James G. Mork; Dina Demner-Fushman; Alan R. Aronson (AMIA, 2013)

Interpreting Consumer Health Questions: The Role of Anaphora and Ellipsis. - Halil Kilicoglu; Marcelo Fiszman; Dina Demner-Fushman (BioNLP@ACL, 2013)

Overview of the ImageCLEF 2013 Medical Tasks. - Alba Garcia Seco de Herrera; Jayashree Kalpathy-Cramer; Dina Demner-Fushman; Sameer K. Antani; Henning Müller (CLEF (Working Notes), 2013)

ITI's Participation in the 2013 Medical Track of ImageCLEF. - Matthew S. Simpson; Daekeun You; Md. Mahmudur Rahman; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (CLEF (Working Notes), 2013)

Annotating image ROIs with text descriptions for multimodal biomedical document retrieval. - Daekeun You; Matthew S. Simpson; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (DRR, 2013)

A robust pointer segmentation in biomedical images toward building a visual ontology for biomedical article retrieval. - Daekeun You; Matthew S. Simpson; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (DRR, 2013)

Classification of CT Figures in Biomedical Articles Based on Body Segments. - Zhiyun Xue; Sameer K. Antani; L. Rodney Long; Dina Demner-Fushman; George R. Thoma (ICHI, 2013)

Continual Development of a Personalized Decision Support System. - Dina Demner-Fushman; Charlotte A. Seckman; Cheryl Fisher; George R. Thoma (MedInfo, 2013)

Multimodal biomedical image retrieval using hierarchical classification and modality fusion. - Md. Mahmudur Rahman; Daekeun You; Matthew S. Simpson; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (Int. J. Multim. Inf. Retr., 2013)

Extracting drug indication information from structured product labels using natural language processing. - Kin Wah Fung; Chiang S. Jao; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2013)

Image retrieval from scientific publications: Text and image content processing to separate multipanel figures. - Emilia Apostolova; Daekeun You; Zhiyun Xue; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (J. Assoc. Inf. Sci. Technol., 2013)

Addressing some statistical challenges of using EHR data for clinical research. - Fiona M. Callaghan; Dina Demner-Fushman; Swapna Abhyankar; Matthew T. Jackson; Mallika Mundkur; Clement J. McDonald (AMIA, 2014)

Vocabulary Density Method for Customized Indexing of MEDLINE Journals. - James G. Mork; Dina Demner-Fushman; Susan Schmidt; Alan R. Aronson (AMIA, 2014)

Error Propagation in EHRs via Copy/Paste: An Analysis of Relative Dates. - Kirk Roberts; Amos Cahan; Dina Demner-Fushman (AMIA, 2014)

Automatically Classifying Question Types for Consumer Health Questions. - Kirk Roberts; Halil Kilicoglu; Marcelo Fiszman; Dina Demner-Fushman (AMIA, 2014)

Facilitating Reconciliation of Inter-Annotator Disagreements. - Johann Stan; Olivier Bodenreider; Kin Wah Fung; Dina Demner-Fushman (AMIA, 2014)

Biomedical image segmentation for semantic visual feature extraction. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (BIBM, 2014)

Coreference Resolution for Structured Drug Product Labels. - Halil Kilicoglu; Dina Demner-Fushman (BioNLP@ACL, 2014)

Decomposing Consumer Health Questions. - Kirk Roberts; Halil Kilicoglu; Marcelo Fiszman; Dina Demner-Fushman (BioNLP@ACL, 2014)

Body Segment Classification for Visible Human Cross Section Slices. - Zhiyun Xue; Sameer K. Antani; L. Rodney Long; Dina Demner-Fushman; George R. Thoma (CBMS, 2014)

Does Figure-Text Improve Biomedical Article Retrieval? A Pilot Study. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (CBMS, 2014)

An MRF Model for Biomedical Image Segmentation. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (CBMS, 2014)

Recent Enhancements to the NLM Medical Text Indexer. - James G. Mork; Dina Demner-Fushman; Susan Schmidt; Alan R. Aronson (CLEF (Working Notes), 2014)

Extraction and labeling high-resolution images from PDF documents. - Suchet K. Chachra; Zhiyun Xue; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (DRR, 2014)

A contour-based shape descriptor for biomedical image classification and retrieval. - Daekeun You; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (DRR, 2014)

Annotating Question Decomposition on Complex Medical Questions. - Kirk Roberts; Kate Masterton; Marcelo Fiszman; Halil Kilicoglu; Dina Demner-Fushman (LREC, 2014)

Integrating visual words as bunch of n-grams for effective biomedical image classification. - Glauco Vitor Pedrosa; Md. Mahmudur Rahman; Sameer K. Antani; Dina Demner-Fushman; L. Rodney Long; Agma J. M. Traina (WACV, 2014)

Interactive cross and multimodal biomedical image retrieval based on automatic region-of-interest (ROI) identification and classification. - Md. Mahmudur Rahman; Daekeun You; Matthew S. Simpson; Sameer K. Antani; Dina Demner-Fushman; George R. Thoma (Int. J. Multim. Inf. Retr., 2014)

Multimodal biomedical image indexing and retrieval using descriptive text and global feature mapping. - Matthew S. Simpson; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (Inf. Retr., 2014)

Research and applications: Combining structured and unstructured data to identify a cohort of ICU patients who received dialysis. - Swapna Abhyankar; Dina Demner-Fushman; Fiona M. Callaghan; Clement J. McDonald (J. Am. Medical Informatics Assoc., 2014)

Automated searches for personalized evidence to prevent hospital acquired infection. - Amos Cahan; Sonya E. Shooshan; Laritza Rodriguez; Dina Demner-Fushman (AMIA, 2015)

Extracting Characteristics of the Study Subjects from Full-Text Articles. - Dina Demner-Fushman; James G. Mork (AMIA, 2015)

An Ensemble Method for Spelling Correction in Consumer Health Questions. - Halil Kilicoglu; Marcelo Fiszman; Kirk Roberts; Dina Demner-Fushman (AMIA, 2015)

Automatic Extraction and Post-coordination of Spatial Relations in Consumer Language. - Kirk Roberts; Laritza Rodriguez; Sonya E. Shooshan; Dina Demner-Fushman (AMIA, 2015)

Automatic Classification of Structured Product Labels for Pregnancy Risk Drug Categories, a Machine Learning Approach. - Laritza Rodriguez; Dina Demner-Fushman (AMIA, 2015)

Foreign object detection in chest X-rays. - Zhiyun Xue; Sema Candemir; Sameer K. Antani; L. Rodney Long; Stefan Jaeger 001; Dina Demner-Fushman; George R. Thoma (BIBM, 2015)

Annotation of Chest Radiology Reports for Indexing and Retrieval. - Dina Demner-Fushman; Sonya E. Shooshan; Laritza Rodriguez; Sameer K. Antani; George R. Thoma (MRDM@ECIR, 2015)

A decade of community-wide efforts in advancing medical image understanding and retrieval. - Dina Demner-Fushman; Sameer K. Antani; Jayashree Kalpathy-Cramer; Henning Müller (Comput. Medical Imaging Graph., 2015)

Evaluating performance of biomedical image retrieval systems - An overview of the medical image retrieval task at ImageCLEF 2004-2013. - Jayashree Kalpathy-Cramer; Alba Garcia Seco de Herrera; Dina Demner-Fushman; Sameer K. Antani; Steven Bedrick; Henning Müller (Comput. Medical Imaging Graph., 2015)

Literature-based biomedical image classification and retrieval. - Matthew S. Simpson; Daekeun You; Md. Mahmudur Rahman; Zhiyun Xue; Dina Demner-Fushman; Sameer K. Antani; George R. Thoma (Comput. Medical Imaging Graph., 2015)

The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs. - Kirk Roberts; Sonya E. Shooshan; Laritza Rodriguez; Swapna Abhyankar; Halil Kilicoglu; Dina Demner-Fushman (J. Biomed. Informatics, 2015)

Aligning Texts and Knowledge Bases with Semantic Sentence Simplification. - Yassine Mrabet; Pavlos Vougiouklis; Halil Kilicoglu; Claire Gardent; Dina Demner-Fushman; Jonathon S. Hare; Elena Simperl (WebNLG, 2016)

Recognizing Question Entailment for Medical Question Answering. - Asma Ben Abacha; Dina Demner-Fushman (AMIA, 2016)

Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'. - Stéphane M. Meystre; Hongfang Liu; Rong Xu; Sivaram Arabandi; Kavishwar B. Wagholikar; Jon D. Patrick; Guergana K. Savova; Chunhua Weng; Pierre Zweigenbaum; Dina Demner-Fushman; Özlem Uzuner; Hua Xu 001 (AMIA, 2016)

Resolving Hierarchical Ambiguity in Indexing Recommendations. - James G. Mork; Dina Demner-Fushman (AMIA, 2016)

Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions. - Yassine Mrabet; Halil Kilicoglu; Kirk Roberts; Dina Demner-Fushman (AMIA, 2016)

Resource Classification for Medical Questions. - Kirk Roberts; Laritza M. Rodriguez; Sonya E. Shooshan; Dina Demner-Fushman (AMIA, 2016)

Towards automatic discovery of Genes related to Human Placenta. - Laritza M. Rodriguez; Stephanie M. Morrison; Kathleen Greenberg; Dina Demner-Fushman (AMIA, 2016)

Modality Classification for Searching Figures in Biomedical Literature. - Zhiyun Xue; Md. Mahmudur Rahman; Sameer K. Antani; L. Rodney Long; Dina Demner-Fushman; George R. Thoma (CBMS, 2016)

A Hybrid Approach to Generation of Missing Abstracts in Biomedical Literature. - Suchet K. Chachra; Asma Ben Abacha; Sonya E. Shooshan; Laritza Rodriguez; Dina Demner-Fushman (COLING, 2016)

Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation. - Hoo-Chang Shin; Kirk Roberts; Le Lu 001; Dina Demner-Fushman; Jianhua Yao 001; Ronald M. Summers (CVPR, 2016)

Unsupervised Ranking of Knowledge Bases for Named Entity Recognition. - Yassine Mrabet; Halil Kilicoglu; Dina Demner-Fushman (ECAI, 2016)

Annotating Named Entities in Consumer Health Questions. - Halil Kilicoglu; Asma Ben Abacha; Yassine Mrabet; Kirk Roberts; Laritza Rodriguez; Sonya E. Shooshan; Dina Demner-Fushman (LREC, 2016)

Annotating Logical Forms for EHR Questions. - Kirk Roberts; Dina Demner-Fushman (LREC, 2016)

Overview of the TREC 2016 Clinical Decision Support Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh (TREC, 2016)

Meta-Learning with Selective Data Augmentation for Medical Entity Recognition. - Asma Ben Abacha; Dina Demner-Fushman (Int. J. Comput. Linguistics Appl., 2016)

State-of-the-art in biomedical literature retrieval for clinical cases: a survey of the TREC 2014 CDS track. - Kirk Roberts; Matthew S. Simpson; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh (Inf. Retr. J., 2016)

Preparing a collection of radiology examinations for distribution and retrieval. - Dina Demner-Fushman; Marc D. Kohli; Marc B. Rosenman; Sonya E. Shooshan; Laritza Rodriguez; Sameer K. Antani; George R. Thoma; Clement J. McDonald (J. Am. Medical Informatics Assoc., 2016)

Interactive use of online health resources: a comparison of consumer and professional questions. - Kirk Roberts; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2016)

TextFlow: A Text Similarity Measure based on Continuous Sequences. - Yassine Mrabet; Halil Kilicoglu; Dina Demner-Fushman (ACL (1), 2017)

CTB: A Custom Taxonomy Builder for Named Entity Extraction. - Dina Demner-Fushman; Willie J. Rogers (AMIA, 2017)

Evaluation of Clinical Text Segmentation to Facilitate Cohort Retrieval. - Tracy Edinger; Dina Demner-Fushman; Aaron M. Cohen; Steven Bedrick; William R. Hersh (AMIA, 2017)

New MetaMap Features for Processing Numerical Tables. - François-Michel Lang; Dina Demner-Fushman (AMIA, 2017)

Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE Challenge. - Kirk Roberts; Anupama E. Gururaj; Xiaoling Chen; Saeid Pournejati; Trevor Cohen; William R. Hersh; Dina Demner-Fushman; Lucila Ohno-Machado; Hua Xu 001 (AMIA, 2017)

Mining the literature for genes associated with placenta-mediated maternal diseases. - Laritza M. Rodriguez; Stephanie M. Morrison; Kathleen Greenberg; Dina Demner-Fushman (AMIA, 2017)

Named entity recognition in functional neuroimaging literature. - Asma Ben Abacha; Alba Garcia Seco de Herrera; Ke Wang; L. Rodney Long; Sameer K. Antani; Dina Demner-Fushman (BIBM, 2017)

NLM at ImageCLEF 2017 Caption Task. - Asma Ben Abacha; Alba Garcia Seco de Herrera; Soumya Gayen; Dina Demner-Fushman; Sameer K. Antani (CLEF (Working Notes), 2017)

NLM_NIH at SemEval-2017 Task 3: from Question Entailment to Question Similarity for Community Question Answering. - Asma Ben Abacha; Dina Demner-Fushman (SemEval@ACL, 2017)

Overview of the TAC 2017 Adverse Reaction Extraction from Drug Labels Track. - Kirk Roberts; Dina Demner-Fushman; Joseph M. Tonning (TAC, 2017)

Overview of the Medical Question Answering Task at TREC 2017 LiveQA. - Asma Ben Abacha; Eugene Agichtein; Yuval Pinter; Dina Demner-Fushman (TREC, 2017)

Overview of the TREC 2017 Precision Medicine Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh; Steven Bedrick; Alexander J. Lazar; Shubham Pant (TREC, 2017)

A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. - Trevor Cohen; Kirk Roberts; Anupama E. Gururaj; Xiaoling Chen; Saeid Pournejati; George Alter; William R. Hersh; Dina Demner-Fushman; Lucila Ohno-Machado; Hua Xu 001 (Database J. Biol. Databases Curation, 2017)

Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge. - Kirk Roberts; Anupama E. Gururaj; Xiaoling Chen; Saeid Pournejati; William R. Hersh; Dina Demner-Fushman; Lucila Ohno-Machado; Trevor Cohen; Hua Xu 001 (Database J. Biol. Databases Curation, 2017)

12 years on - Is the NLM medical text indexer still useful and relevant? - James G. Mork; Alan R. Aronson; Dina Demner-Fushman (J. Biomed. Semant., 2017)

MetaMap Lite: an evaluation of a new Java implementation of MetaMap. - Dina Demner-Fushman; Willie J. Rogers; Alan R. Aronson (J. Am. Medical Informatics Assoc., 2017)

Automated classification of eligibility criteria in clinical trials to facilitate patient-trial matching for specific patient populations. - Kevin Zhang; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2017)

A protocol-driven approach to automatically finding authoritative answers to consumer health questions in online resources. - Ariel Deardorff; Kate Masterton; Kirk Roberts; Halil Kilicoglu; Dina Demner-Fushman (J. Assoc. Inf. Sci. Technol., 2017)

Finding medication doses in the literature. - Dina Demner-Fushman; James G. Mork; Willie J. Rogers; Sonya E. Shooshan; Laritza M. Rodriguez; Alan R. Aronson (AMIA, 2018)

Adverse Reactions and Drug-Drug Interaction Extraction tracks at the Text Analysis Conference (TAC). - Dina Demner-Fushman; Joseph M. Tonning; Kin Wah Fung; Phong Do; Richard D. Boyce; Kirk Roberts (AMIA, 2018)

Increasing UMLS Coverage and Reducing Ambiguity via Automated Creation of Synonymous Terms. - François-Michel Lang; James G. Mork; Dina Demner-Fushman; Alan R. Aronson (AMIA, 2018)

Improving Spelling Correction with Consumer Health Terminology. - Chris J. Lu; Dina Demner-Fushman (AMIA, 2018)

Benchmarking Information Retrieval for Precision Oncology: the TREC Precision Medicine Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh; Steven Bedrick; Alexander J. Lazar; Shubham Pant (AMIA, 2018)

NLM at ImageCLEF 2018 Visual Question Answering in the Medical Domain. - Asma Ben Abacha; Soumya Gayen; Jason J. Lau; Sivaramakrishnan Rajaraman; Dina Demner-Fushman (CLEF (Working Notes), 2018)

Clinical, Consumer Health, and Visual Question Answering. - Dina Demner-Fushman (SIMBig, 2018)

Overview of the TAC 2018 Drug-Drug Interaction Extraction from Drug Labels Track. - Dina Demner-Fushman; Kin Wah Fung; Phong Do; Richard D. Boyce; Travis R. Goodwin (TAC, 2018)

Overview of the TREC 2018 Precision Medicine Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh; Steven Bedrick; Alexander J. Lazar (TREC, 2018)

Semantic annotation of consumer health questions. - Halil Kilicoglu; Asma Ben Abacha; Yassine Mrabet; Sonya E. Shooshan; Laritza Rodriguez; Kate Masterton; Dina Demner-Fushman (BMC Bioinform., 2018)

On the Summarization of Consumer Health Questions. - Asma Ben Abacha; Dina Demner-Fushman (ACL (1), 2019)

Deep Learning from Incomplete Data: Detecting Imminent Risk of Hospital-acquired Pneumonia in ICU Patients. - Travis R. Goodwin; Dina Demner-Fushman (AMIA, 2019)

Classification Types: A New Feature in the SPECIALIST Lexicon. - Chris J. Lu; Amanda Payne; Dina Demner-Fushman (AMIA, 2019)

Drug-drug Interaction Extraction via Transfer Learning. - Yuqing Mao; Kin Wah Fung; Dina Demner-Fushman (AMIA, 2019)

A High Recall Classifier for Selecting Articles for MEDLINE Indexing. - Alastair R. Rae; Max E. Savery; James G. Mork; Dina Demner-Fushman (AMIA, 2019)

Evaluation of System for Selective Indexing Classification. - Max E. Savery; Melanie Huston; James G. Mork; Olga Printseva; Susan Schmidt; Alastair R. Rae; Dina Demner-Fushman (AMIA, 2019)

Overview of the MEDIQA 2019 Shared Task on Textual Inference, Question Entailment and Question Answering. - Asma Ben Abacha; Chaitanya Shivade; Dina Demner-Fushman (BioNLP@ACL, 2019)

VQA-Med: Overview of the Medical Visual Question Answering Task at ImageCLEF 2019. - Asma Ben Abacha; Sadid A. Hasan; Vivek V. Datla; Joey Liu; Dina Demner-Fushman; Henning Müller (CLEF (Working Notes), 2019)

ImageCLEF 2019: Multimedia Retrieval in Medicine, Lifelogging, Security and Nature. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Yashin Dicente Cid; Vitali Liauchuk; Vassili Kovalev; Dzmitri Klimuk; Aleh Tarasau; Asma Ben Abacha; Sadid A. Hasan; Vivek V. Datla; Joey Liu; et al. (CLEF, 2019)

ImageCLEF 2019: Multimedia Retrieval in Lifelogging, Medical, Nature, and Security Applications. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Duc-Tien Dang-Nguyen; Luca Piras 001; Michael Riegler 001; Minh-Triet Tran; Mathias Lux; Cathal Gurrin; Yashin Dicente Cid; Vitali Liauchuk; Vassili Kovalev; et al. (ECIR (2), 2019)

Bridging the Gap Between Consumers' Medication Questions and Trusted Answers. - Asma Ben Abacha; Yassine Mrabet; Mark Sharp; Travis R. Goodwin; Sonya E. Shooshan; Dina Demner-Fushman (MedInfo, 2019)

On Agreements in Visual Understanding. - Yassine Mrabet; Dina Demner-Fushman (ViGIL@NeurIPS, 2019)

Convolutional Neural Network for Automatic MeSH Indexing. - Alastair R. Rae; James G. Mork; Dina Demner-Fushman (PKDD/ECML Workshops (2), 2019)

Overview of the TAC 2019 Track on Drug-Drug Interaction Extraction from Drug Labels. - Travis R. Goodwin; Dina Demner-Fushman; Kin Wah Fung; Phong Do (TAC, 2019)

Overview of the TREC 2019 Precision Medicine Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; William R. Hersh; Steven Bedrick; Alexander J. Lazar; Shubham Pant; Funda Meric-Bernstam (TREC, 2019)

A question-entailment approach to question answering. - Asma Ben Abacha; Dina Demner-Fushman (BMC Bioinform., 2019)

Bridging the Knowledge Gap: Enhancing Question Answering with World and Domain Knowledge. - Travis R. Goodwin; Dina Demner-Fushman (CoRR, 2019)

Spell checker for consumer language (CSpell). - Chris J. Lu; Alan R. Aronson; Sonya E. Shooshan; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2019)

Automatic MeSH Indexing: Revisiting the Subheading Attachment Problem. - Alastair R. Rae; David O. Pritchard; James G. Mork; Dina Demner-Fushman (AMIA, 2020)

Overview of the VQA-Med Task at ImageCLEF 2020: Visual Question Answering and Generation in the Medical Domain. - Asma Ben Abacha; Vivek V. Datla; Sadid A. Hasan; Dina Demner-Fushman; Henning Müller (CLEF (Working Notes), 2020)

Overview of the ImageCLEF 2020: Multimedia Retrieval in Medical, Lifelogging, Nature, and Internet Applications. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Asma Ben Abacha; Vivek V. Datla; Sadid A. Hasan; Dina Demner-Fushman; Serge Kozlovski; Vitali Liauchuk; Yashin Dicente Cid; Vassili Kovalev; Obioma Pelka; et al. (CLEF, 2020)

Flight of the PEGASUS? Comparing Transformers on Few-shot and Zero-shot Multi-document Abstractive Summarization. - Travis R. Goodwin; Max E. Savery; Dina Demner-Fushman (COLING, 2020)

HOLMS: Alternative Summary Evaluation with Large Language Models. - Yassine Mrabet; Dina Demner-Fushman (COLING, 2020)

ImageCLEF 2020: Multimedia Retrieval in Lifelogging, Medical, Nature, and Internet Applications. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Duc-Tien Dang-Nguyen; Liting Zhou; Luca Piras 001; Michael Riegler 001; Pål Halvorsen; Minh-Triet Tran; Mathias Lux; Cathal Gurrin; Jon Chamberlain; et al. (ECIR (2), 2020)

Towards Zero Shot Conditional Summarization with Adaptive Multi-task Fine-Tuning. - Travis R. Goodwin; Max E. Savery; Dina Demner-Fushman (EMNLP (Findings), 2020)

NLM at TREC 2020 Health Misinformation and Deep Learning Tracks. - Yassine Mrabet; Mourad Sarrouti; Asma Ben Abacha; Soumya Gayen; Travis R. Goodwin; Alastair R. Rae; Willie Rogers; Dina Demner-Fushman (TREC, 2020)

Overview of the TREC 2020 Precision Medicine Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; Steven Bedrick; William R. Hersh (TREC, 2020)

Question-Driven Summarization of Answers to Consumer Health Questions. - Max E. Savery; Asma Ben Abacha; Soumya Gayen; Dina Demner-Fushman (CoRR, 2020)

Consumer health information and question answering: helping consumers find answers to their health-related information needs. - Dina Demner-Fushman; Yassine Mrabet; Asma Ben Abacha (J. Am. Medical Informatics Assoc., 2020)

A customizable deep learning model for nosocomial risk prediction from critical care notes with indirect supervision. - Travis R. Goodwin; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2020)

TREC-COVID: rationale and structure of an information retrieval shared task for COVID-19. - Kirk Roberts; Tasmeer Alam; Steven Bedrick; Dina Demner-Fushman; Kyle Lo; Ian Soboroff; Ellen M. Voorhees; Lucy Lu Wang; William R. Hersh (J. Am. Medical Informatics Assoc., 2020)

Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning. - Surabhi Datta; Yuqi Si; Laritza Rodriguez; Sonya E. Shooshan; Dina Demner-Fushman; Kirk Roberts (J. Biomed. Informatics, 2020)

TREC-COVID: constructing a pandemic information retrieval test collection. - Ellen M. Voorhees; Tasmeer Alam; Steven Bedrick; Dina Demner-Fushman; William R. Hersh; Kyle Lo; Kirk Roberts; Ian Soboroff; Lucy Lu Wang (SIGIR Forum, 2020)

Automatic recognition of figurative language in biomedical articles. - Dina Demner-Fushman; Willie J. Rogers; James G. Mork (SDU@AAAI, 2021)

AI-NLM exploration of the Acronym Identification Shared Task at SDU@AAAI-21. - Willie Rogers; Alastair R. Rae; Dina Demner-Fushman (SDU@AAAI, 2021)

Reinforcement Learning for Abstractive Question Summarization with Question-aware Semantic Rewards. - Shweta Yadav 001; Deepak Gupta; Asma Ben Abacha; Dina Demner-Fushman (ACL/IJCNLP (2), 2021)

Reproducibility in biomedical natural language processing: A FAIR approach to what we need to know. - Kevin Bretonnel Cohen; Anna M. Ripple; Asma Ben Abacha; Olivier Bodenreider; Orin Hargraves; Karin Verspoor; Pierre Zweigenbaum; Dina Demner-Fushman (AMIA, 2021)

Overview of the MEDIQA 2021 Shared Task on Summarization in the Medical Domain. - Asma Ben Abacha; Yassine Mrabet; Yuhao Zhang 004; Chaitanya Shivade; Curtis P. Langlotz; Dina Demner-Fushman (BioNLP@NAACL-HLT, 2021)

Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering and Generation in the Medical Domain. - Asma Ben Abacha; Mourad Sarrouti; Dina Demner-Fushman; Sadid A. Hasan; Henning Müller (CLEF (Working Notes), 2021)

Overview of the ImageCLEF 2021: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Asma Ben Abacha; Mourad Sarrouti; Dina Demner-Fushman; Sadid A. Hasan; Serge Kozlovski; Vitali Liauchuk; Yashin Dicente Cid; Vassili Kovalev; Obioma Pelka; et al. (CLEF, 2021)

A Neural Text Ranking Approach for Automatic MeSH Indexing. - Alastair R. Rae; James G. Mork; Dina Demner-Fushman (CLEF (Working Notes), 2021)

NLM at BioASQ Synergy 2021: Deep Learning-based Methods for Biomedical Semantic Question Answering about COVID-19. - Mourad Sarrouti; Deepak Gupta; Asma Ben Abacha; Dina Demner-Fushman (CLEF (Working Notes), 2021)

The 2021 ImageCLEF Benchmark: Multimedia Retrieval in Medical, Nature, Internet and Social Media Applications. - Bogdan Ionescu; Henning Müller; Renaud Péteri; Asma Ben Abacha; Dina Demner-Fushman; Sadid A. Hasan; Mourad Sarrouti; Obioma Pelka; Christoph M. Friedrich; Alba Garcia Seco de Herrera; Janadhip Jacutprakart; Vassili Kovalev; et al. (ECIR (2), 2021)

Evidence-based Fact-Checking of Health-related Claims. - Mourad Sarrouti; Asma Ben Abacha; Yassine Mrabet; Dina Demner-Fushman (EMNLP (Findings), 2021)

Multi-Task Transfer Learning with Data Augmentation for Recognizing Question Entailment in the Medical Domain. - Mourad Sarrouti; Asma Ben Abacha; Dina Demner-Fushman (ICHI, 2021)

Goal-Driven Visual Question Generation from Radiology Images. - Mourad Sarrouti; Asma Ben Abacha; Dina Demner-Fushman (Inf., 2021)

Searching for scientific evidence in a pandemic: An overview of TREC-COVID. - Kirk Roberts; Tasmeer Alam; Steven Bedrick; Dina Demner-Fushman; Kyle Lo; Ian Soboroff; Ellen M. Voorhees; Lucy Lu Wang; William R. Hersh (J. Biomed. Informatics, 2021)

Overview of the MedVidQA 2022 Shared Task on Medical Video Question-Answering. - Deepak Gupta; Dina Demner-Fushman (BioNLP@ACL, 2022)

Overview of the TREC 2022 Clinical Trials Track. - Kirk Roberts; Dina Demner-Fushman; Ellen M. Voorhees; Steven Bedrick; William R. Hersh (TREC, 2022)

A Dataset for Medical Instructional Video Classification and Question Answering. - Deepak Gupta; Kush Attal; Dina Demner-Fushman (CoRR, 2022)

CHQ-Summ: A Dataset for Consumer Healthcare Question Summarization. - Shweta Yadav 001; Deepak Gupta; Dina Demner-Fushman (CoRR, 2022)

Clinical Language Understanding Evaluation (CLUE). - Travis R. Goodwin; Dina Demner-Fushman (CoRR, 2022)

A Dataset for Plain Language Adaptation of Biomedical Abstracts. - Kush Attal; Brian D. Ondov; Dina Demner-Fushman (CoRR, 2022)

A survey of automated methods for biomedical text simplification. - Brian D. Ondov; Kush Attal; Dina Demner-Fushman (J. Am. Medical Informatics Assoc., 2022)

Question-aware transformer models for consumer health question summarization. - Shweta Yadav 001; Deepak Gupta; Asma Ben Abacha; Dina Demner-Fushman (J. Biomed. Informatics, 2022)

The National Library of Medicine indexer assignment dataset: A new large-scale dataset for reviewer assignment research. - Alastair R. Rae; James G. Mork; Dina Demner-Fushman (J. Assoc. Inf. Sci. Technol., 2023)

Medical image retrieval via nearest neighbor search on pre-trained image features. - Deepak Gupta; Russell F. Loane; Soumya Gayen; Dina Demner-Fushman (Knowl. Based Syst., 2023)

Empowering Language Model with Guided Knowledge Fusion for Biomedical Document Re-ranking. - Deepak Gupta; Dina Demner-Fushman (AIME (1), 2024)

Sentence-Aligned Simplification of Biomedical Abstracts. - Brian D. Ondov; Dina Demner-Fushman (AIME (1), 2024)

Towards Answering Health-related Questions from Medical Videos: Datasets and Approaches. - Deepak Gupta; Kush Attal; Dina Demner-Fushman (LREC/COLING, 2024)

Pedagogically Aligned Objectives Create Reliable Automatic Cloze Tests. - Brian D. Ondov; Kush Attal; Dina Demner-Fushman (NAACL-HLT, 2024)

Toward Relieving Clinician Burden by Automatically Generating Progress Notes using Interim Hospital Data. - Sarvesh Soni; Dina Demner-Fushman (CoRR, 2024)

Overview of TREC 2024 Biomedical Generative Retrieval (BioGen) Track. - Deepak Gupta; Dina Demner-Fushman; William R. Hersh; Steven Bedrick; Kirk Roberts (CoRR, 2024)

Overview of TREC 2024 Medical Video Question Answering (MedVidQA) Track. - Deepak Gupta; Dina Demner-Fushman (CoRR, 2024)

On the role of the UMLS in supporting diagnosis generation proposed by Large Language Models. - Majid Afshar; Yanjun Gao; Deepak Gupta; Emma Croxford; Dina Demner-Fushman (J. Biomed. Informatics, 2024)

JEBS: A Fine-grained Biomedical Lexical Simplification Task. - William Xia; Ishita Unde; Brian David Ondov; Dina Demner-Fushman (ACL (Findings), 2025)

A Dataset for Addressing Patient's Information Needs related to Clinical Course of Hospitalization. - Sarvesh Soni; Dina Demner-Fushman (CoRR, 2025)

Overview of the ClinIQLink 2025 Shared Task on Medical Question-Answering. - Brandon Colelough; Davis Bartels; Dina Demner-Fushman (CoRR, 2025)

Lessons from the TREC Plain Language Adaptation of Biomedical Abstracts (PLABA) track. - Brian D. Ondov; William Xia; Kush Attal; Ishita Unde; Jerry He; Dina Demner-Fushman (CoRR, 2025)