CSBFinder: discovery of colinear syntenic blocks across thousands of prokaryotic genomes. - Dina Svetlitsky; Tal Dagan; Vered Chalifa-Caspi; Michal Ziv-Ukelson (Bioinform., 2019)

Discovery of multi-operon colinear syntenic blocks in microbial genomes. - Dina Svetlitsky; Tal Dagan; Michal Ziv-Ukelson (Bioinform., 2020)

Approximate search for known gene clusters in new genomes using PQ-trees. - Galia R. Zimerman; Dina Svetlitsky; Meirav Zehavi; Michal Ziv-Ukelson (Algorithms Mol. Biol., 2021)

Predicting the pathogenicity of bacterial genomes using widely spread protein families. - Shaked Naor-Hoffmann; Dina Svetlitsky; Neta Sal-Man; Yaron Orenstein; Michal Ziv-Ukelson (BMC Bioinform., 2022)