OncoDB.HCC: an integrated oncogenomic database of hepatocellular carcinoma revealed aberrant cancer target genes and loci. - Wen-Hui Su; Chuan-Chuan Chao; Shiou-Hwei Yeh; Ding-Shinn Chen; Pei-Jer Chen; Yuh-Shan Jou (Nucleic Acids Res., 2007)

De novo assembly of highly polymorphic metagenomic data using in situ generated reference sequences and a novel BLAST-based assembly pipeline. - You-Yu Lin; Chia-Hung Hsieh; Jiun-Hong Chen; Xuemei Lu; Jia-Horng Kao; Pei-Jer Chen; Ding-Shinn Chen; Hurng-Yi Wang (BMC Bioinform., 2017)