Determining equilibrium constants for dimerization reactions from molecular dynamics simulations. - Djurre H. De Jong; Lars V. Schäfer; Alex H. de Vries; Siewert J. Marrink; Herman J. C. Berendsen; Helmut Grubmüller (J. Comput. Chem., 2011)

Martini straight: Boosting performance using a shorter cutoff and GPUs. - Djurre H. De Jong; Svetlana Baoukina; Helgi I. Ingólfsson; Siewert J. Marrink (Comput. Phys. Commun., 2016)