Comprehensive analysis of structural and sequencing data reveals almost unconstrained chain pairing in TCRαβ complex. - Dmitrii S. Shcherbinin; Vlad A. Belousov; Mikhail Shugay (PLoS Comput. Biol., 2020)

Evaluating performance of existing computational models in predicting CD8+ T cell pathogenic epitopes and cancer neoantigens. - Paul R. Buckley; Chloe H. Lee; Ruichong Ma; Isaac Woodhouse; Jeongmin Woo; Vasily Tsvetkov; Dmitrii S. Shcherbinin; Agne Antanaviciute; Mikhail Shughay; Margarida Rei; Alison Simmons; Hashem Koohy (Briefings Bioinform., 2022)

Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen. - Vadim K. Karnaukhov; Dmitrii S. Shcherbinin; Anton O. Chugunov; Dmitriy M. Chudakov; Roman G. Efremov; Ivan V. Zvyagin; Mikhail Shugay (Nat. Comput. Sci., 2024)