Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm. - T. Waleev; Dmitry Shtokalo; Tatiana Konovalova; Nico Voss; Evgeny Cheremushkin; Philip Stegmaier; Olga V. Kel-Margoulis; Edgar Wingender; Alexander E. Kel (Nucleic Acids Res., 2006)

Hydrocephalus verification on brain magnetic resonance images with deep convolutional neural networks and "transfer learning" technique. - Alexey Demyanchuk; Ekaterina Pushkina; Nikolay Russkikh; Dmitry Shtokalo; Sergey Mishinov (CoRR, 2019)

Style transfer with variational autoencoders is a promising approach to RNA-Seq data harmonization and analysis. - Nikolay Russkikh; Denis V. Antonets; Dmitry Shtokalo; Alexander Makarov; Yuri Vyatkin; Alexey Zakharov; Evgeny Terentyev (Bioinform., 2020)

CellCountCV - A Web-Application for Accurate Cell Counting and Automated Batch Processing of Microscopic Images Using Fully Convolutional Neural Networks. - Denis V. Antonets; Nikolay Russkikh; Antoine Sanchez; Victoria Kovalenko; Elvira Bairamova; Dmitry Shtokalo; Sergey Medvedev; Suren Zakian (Sensors, 2020)