Fast, clash-free RNA conformational morphing using molecular junctions. - Amélie Héliou; Dominik Budday; Rasmus Fonseca; Henry van den Bedem (Bioinform., 2017)

Collision-free poisson motion planning in ultra high-dimensional molecular conformation spaces. - Rasmus Fonseca; Dominik Budday; Henry van den Bedem (J. Comput. Chem., 2018)

Kinematic Flexibility Analysis: Hydrogen Bonding Patterns Impart a Spatial Hierarchy of Protein Motion. - Dominik Budday; Sigrid Leyendecker; Henry van den Bedem (J. Chem. Inf. Model., 2018)