Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling. - Dominik M. Wittmann; Jan Krumsiek; Julio Saez-Rodriguez; Douglas A. Lauffenburger; Steffen Klamt; Fabian J. Theis (BMC Syst. Biol., 2009)

Spatial Analysis of Expression Patterns Predicts Genetic Interactions at the Mid-Hindbrain Boundary. - Dominik M. Wittmann; Florian Blöchl; Dietrich Trümbach; Wolfgang Wurst; Nilima Prakash; Fabian J. Theis (PLoS Comput. Biol., 2009)

Reconstruction of graphs based on random walks. - Dominik M. Wittmann; Daniel Schmidl; Florian Blöchl; Fabian J. Theis (Theor. Comput. Sci., 2009)

Odefy – From discrete to continuous models. - Jan Krumsiek; Sebastian Pölsterl; Dominik M. Wittmann; Fabian J. Theis (BMC Bioinform., 2010)

Sharpening of expression domains induced by transcription and microRNA regulation within a spatio-temporal model of mid-hindbrain boundary formation. - Sabrina Hock; Yen-Kar Ng; Jan Hasenauer; Dominik M. Wittmann; Dominik Lutter; Dietrich Trümbach; Wolfgang Wurst; Nilima Prakash; Fabian J. Theis (BMC Syst. Biol., 2013)

Truth-Content and Phase Transitions of Random Boolean Networks with Generic Logics. - Dominik M. Wittmann; Sabrina Hock; Fabian J. Theis (SIAM J. Appl. Dyn. Syst., 2013)