Systematic Comparison of Advanced Network Analysis and Visualization of Lipidomics Data. - Jana Schwarzerova; Dominika Olesová; Ales Kvasnicka; David Friedecký; Margaret Varga; Valentine Provazník; Wolfram Weckwerth (IWBBIO (1), 2023)

MInfer: Bridging MetaboAnalyst and Jacobian analysis for metabolomic networks. - Jana Schwarzerova; Erdo Gabor Mate; Jakub Idkowiak; Dominika Olesová; Ales Kvasnicka; Dana Dobesova; David Friedecký; Valentyna Provaznik; Jozef Skarda; Wolfram Weckwerth; Thomas Nägele (Comput. Methods Programs Biomed., 2025)