Detecting Emerging Transmissibility of Avian Influenza Virus in Human Households. - Michiel van Boven; Marion Koopmans; Mirna Du Ry van Beest Holle; Adam Meijer; Don Klinkenberg; Christl A. Donnelly; Hans Heesterbeek (PLoS Comput. Biol., 2007)

Mitigation Strategies for Pandemic Influenza A: Balancing Conflicting Policy Objectives. - T. Déirdre Hollingsworth; Don Klinkenberg; Hans Heesterbeek; Roy M. Anderson (PLoS Comput. Biol., 2011)

Simultaneous inference of phylogenetic and transmission trees in infectious disease outbreaks. - Don Klinkenberg; Jantien A. Backer; Xavier Didelot; Caroline Colijn; Jacco Wallinga (PLoS Comput. Biol., 2017)

Optimal vaccine allocation for COVID-19 in the Netherlands: A data-driven prioritization. - Fuminari Miura; Ka Yin Leung; Don Klinkenberg; Kylie E. C. Ainslie; Jacco Wallinga (PLoS Comput. Biol., 2021)

A Bayesian inference method to estimate transmission trees with multiple introductions; applied to SARS-CoV-2 in Dutch mink farms. - Bastiaan Van der Roest; Martin C. J. Bootsma; Egil A. J. Fischer; Don Klinkenberg; Mirjam E. Kretzschmar (PLoS Comput. Biol., 2023)