BLRM: A Basic Linear Ranking Model for Protein Interface Prediction. - Basir Shariat; Don Neumann; Asa Ben-Hur (BIBM, 2018)

RODAN: a fully convolutional architecture for basecalling nanopore RNA sequencing data. - Don Neumann; Anireddy S. N. Reddy; Asa Ben-Hur (BMC Bioinform., 2022)

On the choice of negative examples for prediction of host-pathogen protein interactions. - Don Neumann; Soumyadip Roy; Fayyaz ul Amir Afsar Minhas; Asa Ben-Hur (Frontiers Bioinform., 2022)