An integrated confocal and magnetic resonance microscope for observing living cells. - Don Simone Daly; Robert A. Wind; Paul D. Majors; Kevin K. Anderson; G. R. Holtom; Eric J. Ackerman (ISBI, 2002)

Estimating Probabilities of Peptide Assignments to LC-FTICR-MS Observations. - Kevin K. Anderson; Matthew E. Monroe; Don Simone Daly (METMBS, 2004)

Automated Microarray Image Analysis Toolbox for MATLAB. - Amanda M. White; Don Simone Daly; Alan R. Willse; Miroslava Protic; Darrell P. Chandler (Bioinform., 2005)

Evaluating concentration estimation errors in ELISA microarray experiments. - Don Simone Daly; Amanda M. White; Susan M. Varnum; Kevin K. Anderson; Richard C. Zangar (BMC Bioinform., 2005)

ProMAT: protein microarray analysis tool. - Amanda M. White; Don Simone Daly; Susan M. Varnum; Kevin K. Anderson; Nikki Bollinger; Richard C. Zangar (Bioinform., 2006)

SEBINI-CABIN: An Analysis Pipeline for Biological Network Inference, with a Case Study in Protein-Protein Interaction Network Reconstruction. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; W. Hayes McDonald; Dale Pelletier; et al. (ICMLA, 2007)

A Bayesian estimator of protein-protein association probabilities. - Jason M. Gilmore; Deanna L. Auberry; Julia L. Sharp; Amanda M. White; Kevin K. Anderson; Don Simone Daly (Bioinform., 2008)

MASIC: A software program for fast quantitation and flexible visualization of chromatographic profiles from detected LC-MS(/MS) features. - Matthew E. Monroe; Jason L. Shaw; Don Simone Daly; Joshua N. Adkins; Richard D. Smith (Comput. Biol. Chem., 2008)

ELISA-BASE: an integrated bioinformatics tool for analyzing and tracking ELISA microarray data. - Amanda M. White; James R. Collett; Shannon L. Seurynck-Servoss; Don Simone Daly; Richard C. Zangar (Bioinform., 2009)

Statistically appraising process quality of affinity isolation experiments. - Julia L. Sharp; John J. Borkowski; Denise Schmoyer; Don Simone Daly; Samuel O. Purvine; William R. Cannon; Gregory B. Hurst (Comput. Stat. Data Anal., 2009)

An analysis pipeline for the inference of protein-protein interaction networks. - Ronald C. Taylor; Mudita Singhal; Don Simone Daly; Jason M. Gilmore; William R. Cannon; Kelly Domico; Amanda M. White; Deanna L. Auberry; Kenneth J. Auberry; Brian Hooker; Gregory B. Hurst; Jason E. McDermott; et al. (Int. J. Data Min. Bioinform., 2009)