An Analytical Algorithm for the Rapid Determination of the Solvent Accessibility of Points in a Three-Dimensional Lattice around a Solute Molecule. - Tony You; Donald Bashford (J. Comput. Chem., 1995)

An Object-Oriented Programming Suite for Electrostatic Effects in Biological Molecules. - Donald Bashford (ISCOPE, 1997)

Multiple-site ligand binding to flexible macromolecules: Separation of global and local conformational change and an iterative mobile clustering approach. - Velin Z. Spassov; Donald Bashford (J. Comput. Chem., 1999)

Effective Born radii in the generalized Born approximation: The importance of being perfect. - Alexey Onufriev; David A. Case; Donald Bashford (J. Comput. Chem., 2002)

Ligand Binding Mode Prediction by Docking: Mdm2/Mdmx Inhibitors as a Case Study. - Nagakumar Bharatham; Kavitha Bharatham; Anang A. Shelat; Donald Bashford (J. Chem. Inf. Model., 2014)