Characterization of Binding Sites of Eukaryotic Transcription Factors. - Jiang Qian; C. Jimmy Lin; Donald J. Zack (Genom. Proteom. Bioinform., 2006)

Identification of tissue-specific cis-regulatory modules based on interactions between transcription factors. - Xueping Yu; C. Jimmy Lin; Donald J. Zack; Jiang Qian (BMC Bioinform., 2007)

TiGER: A database for tissue-specific gene expression and regulation. - Xiong Liu 001; Xueping Yu; Donald J. Zack; Heng Zhu; Jiang Qian (BMC Bioinform., 2008)

Relating periodicity of nucleosome organization and gene regulation. - Jun Wan 002; C. Jimmy Lin; Donald J. Zack; Jiang Qian (Bioinform., 2009)

Computational analysis of tissue-specific gene networks: application to murine retinal functional studies. - Jianfei Hu; Jun Wan 002; Laszlo Hackler Jr.; Donald J. Zack; Jiang Qian (Bioinform., 2010)

Resolving complex research data management issues in biomedical laboratories: Qualitative study of an industry-academia collaboration. - Sahiti Myneni; Vimla L. Patel; G. Steven Bova; Jian Wang; Christopher Ackermann; Cynthia A. Berlinicke; Steve H. Chen; Mikael Lindvall; Donald J. Zack (Comput. Methods Programs Biomed., 2016)

Longitudinal analysis of mouse SDOCT volumes. - Bhavna Josephine Antony; Aaron Carass; Andrew Lang; Byung-Jin Kim; Donald J. Zack; Jerry L. Prince (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2017)

PanoView: An iterative clustering method for single-cell RNA sequencing data. - Ming-Wen Hu; Dong Won Kim; Sheng Liu; Donald J. Zack; Seth Blackshaw; Jiang Qian (PLoS Comput. Biol., 2019)

First Organoid Intelligence (OI) workshop to form an OI community. - Itzy E. Morales Pantoja; Lena Smirnova; Alysson R. Muotri; Karl J. Wahlin; Jeffrey Kahn; J. Lomax Boyd; David H. Gracias; Timothy D. Harris; Tzahi Cohen-Karni; Brian S. Caffo; Alexander S. Szalay; Fang Han; et al. (Frontiers Artif. Intell., 2023)