3DIV: A 3D-genome Interaction Viewer and database. - Dongchan Yang; Insu Jang; Jinhyuk Choi; Minseo Kim; Andrew J. Lee; Hyun-Woong Kim; Junghyun Eom; Dongsup Kim; Inkyung Jung; Byungwook Lee (Nucleic Acids Res., 2018)

A new class of constitutively active super-enhancers is associated with fast recovery of 3D chromatin loops. - Jayoung Ryu; Hyun-Woong Kim; Dongchan Yang; Andrew J. Lee; Inkyung Jung (BMC Bioinform., 2019)

DeepLUCIA: predicting tissue-specific chromatin loops using Deep Learning-based Universal Chromatin Interaction Annotator. - Dongchan Yang; Taesu Chung; Dongsup Kim (Bioinform., 2022)