Learning Monotone DNF with an Incomplete Membership Oracle. - Dana Angluin; Donna K. Slonim (COLT, 1991)

The Power of Team Exploration: Two Robots Can Learn Unlabeled Directed Graphs - Michael A. Bender; Donna K. Slonim (FOCS, 1994)

Randomly Fallible Teachers: Learning Monotone DNF with an Incomplete Membership Oracle. - Dana Angluin; Donna K. Slonim (Mach. Learn., 1994)

Learning from imperfect data in theory and practice. - Donna K. Slonim (1996)

Building Human Genome Maps with Radiation Hybrids. - Donna K. Slonim; Leonid Kruglyak; Lincoln Stein; Eric S. Lander (J. Comput. Biol., 1997)

Learning with Unreliable Boundary Queries. - Avrim Blum; Prasad Chalasani; Sally A. Goldman; Donna K. Slonim (J. Comput. Syst. Sci., 1998)

Computational biology. - Jill P. Mesirov; Donna K. Slonim (Comput. Sci. Eng., 1999)

Class prediction and discovery using gene expression data. - Donna K. Slonim; Pablo Tamayo; Jill P. Mesirov; Todd R. Golub; Eric S. Lander (RECOMB, 2000)

Motif Evaluation by Leave-one-out Scoring. - Audrey Girouard; Noah W. Smith; Donna K. Slonim (CIBCB, 2006)

A Distance-Based Method for Detecting Horizontal Gene Transfer in Whole Genomes. - Xintao Wei; Lenore Cowen; Carla E. Brodley; Arthur Brady; D. Sculley; Donna K. Slonim (ISBRA, 2008)

Mining Protein-Protein Interactions from GeneRIFs with OpenDMAP. - Andrew D. Fox; William A. Baumgartner Jr.; Helen L. Johnson 001; Lawrence E. Hunter; Donna K. Slonim (BioLINK@ISMB/ECCB, 2008)

High Throughput Interaction Data Reveals Degree Conservation of Hub Proteins. - Andrew D. Fox; D. Taylor; Donna K. Slonim (Pacific Symposium on Biocomputing, 2009)

Getting Started in Gene Expression Microarray Analysis. - Donna K. Slonim; Itai Yanai (PLoS Comput. Biol., 2009)

Anomaly Detection Using an Ensemble of Feature Models. - Keith Noto; Carla E. Brodley; Donna K. Slonim (ICDM, 2010)

Session Introduction. - Tanya Y. Berger-Wolf; Teresa M. Przytycka; Mona Singh 001; Donna K. Slonim (Pacific Symposium on Biocomputing, 2010)

Toward the dynamic interactome: it's about time. - Teresa M. Przytycka; Mona Singh 001; Donna K. Slonim (Briefings Bioinform., 2010)

Evaluating Between-Pathway Models with Expression Data. - Benjamin J. Hescott; Mark D. M. Leiserson; Lenore J. Cowen; Donna K. Slonim (J. Comput. Biol., 2010)

Mining Functionally Relevant Gene Sets for Analyzing Physiologically Novel Clinical Expression Data. - Sevin Turcan; Xintao Wei; Jill L. Maron; Douglas E. Vetter; Donna K. Slonim (Pacific Symposium on Biocomputing, 2011)

Connectedness of PPI network neighborhoods identifies regulatory hub proteins. - Andrew D. Fox; Benjamin J. Hescott; Anselm Blumer; Donna K. Slonim (Bioinform., 2011)

FRaC: a feature-modeling approach for semi-supervised and unsupervised anomaly detection. - Keith Noto; Carla E. Brodley; Donna K. Slonim (Data Min. Knowl. Discov., 2012)

CSAX: Characterizing Systematic Anomalies in eXpression Data. - Keith Noto; Carla E. Brodley; Saeed Majidi; Diana W. Bianchi; Donna K. Slonim (RECOMB, 2014)

DFLAT: functional annotation for human development. - Heather C. Wick; Harold J. Drabkin; Huy Ngu; Michael Sackman; Craig Fournier; Jessica Haggett; Judith A. Blake; Diana W. Bianchi; Donna K. Slonim (BMC Bioinform., 2014)

Finding Novel Molecular Connections between Developmental Processes and Disease. - Jisoo Park; Heather C. Wick; Daniel E. Kee; Keith Noto; Jill L. Maron; Donna K. Slonim (PLoS Comput. Biol., 2014)

CSAX: Characterizing Systematic Anomalies in eXpression Data. - Keith Noto; Saeed Majidi; Andrea G. Edlow; Heather C. Wick; Diana W. Bianchi; Donna K. Slonim (J. Comput. Biol., 2015)

Guest Editors' Introduction: Selected Papers from ACM-BCB 2013. - Srinivas Aluru; Donna K. Slonim (IEEE ACM Trans. Comput. Biol. Bioinform., 2015)

Building a Molecular Taxonomy of Disease. - Jisoo Park; Benjamin J. Hescott; Donna K. Slonim (BCB, 2017)

Scalable FRaC Variants: Anomaly Detection for Precision Medicine. - Cyrus Cousins; Christopher M. Pietras; Donna K. Slonim (IPDPS Workshops, 2017)

Towards a more molecular taxonomy of disease. - Jisoo Park; Benjamin J. Hescott; Donna K. Slonim (J. Biomed. Semant., 2017)

TEMPO: Detecting Pathway-Specific Temporal Dysregulation of Gene Expression in Disease. - Christopher Michael Pietras; Faith Ocitti; Donna K. Slonim (BCB, 2018)

Putting benchmarks in their rightful place: The heart of computational biology. - Bjoern Peters; Steven E. Brenner; Edwin Wang; Donna K. Slonim; Maricel G. Kann (PLoS Comput. Biol., 2018)

aTEMPO: Pathway-Specific Temporal Anomalies for Precision Therapeutics. - Christopher Michael Pietras; Liam Power; Donna K. Slonim (PSB, 2020)

ISMB 2020 proceedings. - Nadia El-Mabrouk; Donna K. Slonim (Bioinform., 2020)

FiT: fiber-based tensor completion for drug repurposing. - Aysegul Bumin; Anna M. Ritz; Donna K. Slonim; Tamer Kahveci; Kejun Huang (BCB, 2022)

Processed Data for "Improving Gene Regulatory Network Inference using Dropout Augmentation". - Hao Zhu; Donna K. Slonim (Zenodo, 2024)