Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline. - Jeffrey G. Reid; Andrew Carroll; Narayanan Veeraraghavan; Mahmoud Dahdouli; Andreas Sundquist; Adam C. English; Matthew N. Bainbridge; Simon White; William J. Salerno; Christian Buhay; Fuli Yu; Donna M. Muzny; et al. (BMC Bioinform., 2014)

Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR). - Xinxia Peng; Jean Thierry-Mieg; Danielle Thierry-Mieg; Andrew Nishida; Lenore Pipes; Marjan Bozinoski; Matthew J. Thomas; Sara Kelly; Jeffrey M. Weiss; Muthuswamy Raveendran; Donna M. Muzny; Richard A. Gibbs; et al. (Nucleic Acids Res., 2015)

SV-STAT accurately detects structural variation via alignment to reference-based assemblies. - Caleb F. Davis; Deborah I. Ritter; David A. Wheeler; Hongmei Wang; Yan Ding; Shannon P. Dugan; Matthew N. Bainbridge; Donna M. Muzny; Pulivarthi H. Rao; Tsz-Kwong Man; Sharon E. Plon; Richard A. Gibbs; et al. (Source Code Biol. Medicine, 2016)