Object-oriented implementations of the MPDATA advection equation solver in C++, Python and Fortran - Sylwester Arabas; Dorota Jarecka; Anna Jaruga; Maciej Fijalkowski (CoRR, 2013)

Formula translation in Blitz++, NumPy and modern Fortran: A case study of the language choice tradeoffs. - Sylwester Arabas; Dorota Jarecka; Anna Jaruga; Maciej Fijalkowski (Sci. Program., 2014)

Python bindings for libcloudph++. - Dorota Jarecka; Sylwester Arabas; Davide Del Vento (CoRR, 2015)

A spreading drop of shallow water. - Dorota Jarecka; Anna Jaruga; Piotr K. Smolarkiewicz (J. Comput. Phys., 2015)

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. 0.13.1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0-rc1. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Christopher J. Markiewicz; et al. (Zenodo, 2017)

nipy/nipype: 0.14.0. - Krzysztof J. Gorgolewski; Oscar Esteban; David Gage Ellis; Michael Philipp Notter; Erik Ziegler; Hans J. Johnson; Carlo Hämäläinen; Benjamin Yvernault; Christopher J. Markiewicz; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; et al. (Zenodo, 2017)

nipy/nipype: Nipype - v1.0.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; Michael Philipp Notter; Christopher Burns 002; David Gage Ellis; Hans J. Johnson; Alexandre Manhães-Savio; Carlo Hämäläinen; Dorota Jarecka; Benjamin Yvernault; Christopher J. Markiewicz; et al. (Zenodo, 2018)

nipy/nipype: 1.0.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Christopher J. Markiewicz; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; David Gage Ellis; Christopher J. Markiewicz; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Dorota Jarecka; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: Nipype 1.0.3. - Krzysztof J. Gorgolewski; Oscar Esteban; Erik Ziegler; Christopher J. Markiewicz; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.0.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: Nipype 1.1.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Dorota Jarecka; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Hans J. Johnson; Dorota Jarecka; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Hans J. Johnson; Dorota Jarecka; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.3. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hamalainen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.5. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.6. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.7. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging. - David N. Kennedy; Sanu Ann Abraham; Julianna F. Bates; Albert Crowley; Satrajit S. Ghosh; Tom Gillespie; Mathias Goncalves; Jeffrey S. Grethe; Yaroslav O. Halchenko; Michael Hanke; Christian Haselgrove; Steven M. Hodge; et al. (Frontiers Neuroinformatics, 2019)

nipy/nipype: 1.1.8. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.1.9. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.3. - Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0-rc1. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nibabel: 3.0.0rc1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; Demian Wassermann; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nibabel: 3.0.0rc2. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; Demian Wassermann; et al. (Zenodo, 2019)

nipy/nibabel: 3.0.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; Demian Wassermann; et al. (Zenodo, 2019)

nipy/nipype: 1.4.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; David Gage Ellis; Benjamin Yvernault; Carlo Hämäläinen; Michael Philipp Notter; Taylor Salo; et al. (Zenodo, 2019)

Pydra - a flexible and lightweight dataflow engine for scientific analyses. - Dorota Jarecka; Mathias Goncalves; Christopher J. Markiewicz; Oscar Esteban; Nicole Lo; Jakub Kaczmarzyk; Satrajit S. Ghosh (SciPy, 2020)

nipy/nibabel: 3.0.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; Demian Wassermann; et al. (Zenodo, 2020)

nipy/nipype: 1.4.1. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.4.2. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nibabel: 3.0.2. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; Demian Wassermann; et al. (Zenodo, 2020)

nipy/nibabel: 3.1.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; et al. (Zenodo, 2020)

nipy/nibabel: 3.1.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; Eric Larson; et al. (Zenodo, 2020)

nipy/nipype: 1.5.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

nipy/nipype: 1.5.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

nipy/nibabel: 3.2.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2020)

nipy/nibabel: 3.2.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2020)

neurostuff/NiMARE: 0.0.4. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2020)

neurostuff/NiMARE: 0.0.5. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2020)

DataLad: distributed system for joint management of code, data, and their relationship. - Yaroslav O. Halchenko; Kyle Meyer; Benjamin Poldrack; Debanjum Singh Solanky; Adina S. Wagner; Jason Gors; Dave MacFarlane; Dorian Pustina; Vanessa V. Sochat; Satrajit S. Ghosh; Christian Mönch; Christopher J. Markiewicz; et al. (J. Open Source Softw., 2021)

neurostuff/NiMARE: 0.0.6. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.7rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.7. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.9. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.10rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.10rc2. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

nipy/nipype: 1.7.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.10. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.11rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2021)

neurostuff/NiMARE: 0.0.11. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc2. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

nipy/nipype: 1.7.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc3. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

nipy/nibabel: 3.2.2. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2022)

nipy/nibabel: 4.0.0rc0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2022)

nipy/nibabel. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2022)

NiMARE: Neuroimaging Meta-Analysis Research Environment. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; Murat Bilgel; Katherine L. Bottenhorn; Dorota Jarecka; James Kent; Adam Kimbler; Dylan Nielson; Kendra M. Oudyk; Julio A. Peraza-Goicolea; et al. (Zenodo, 2022)

NiMARE: Neuroimaging Meta-Analysis Research Environment. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; Murat Bilgel; Katherine L. Bottenhorn; Dorota Jarecka; James Kent; Adam Kimbler; Dylan Nielson; Kendra M. Oudyk; Julio A. Peraza-Goicolea; et al. (Zenodo, 2022)

NiMARE: Neuroimaging Meta-Analysis Research Environment. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; Murat Bilgel; Katherine L. Bottenhorn; Dorota Jarecka; James D. Kent; Adam Kimbler; Dylan Nielson; Kendra M. Oudyk; Julio A. Peraza-Goicolea; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc4. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc5. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc6. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12rc7. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

nipy/nipype: 1.8.3. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

neurostuff/NiMARE: 0.0.12. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2022)

nipy/nibabel: 5.0.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.0.13rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.0.13. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

nipy/nibabel: 5.0.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.0.14rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.0.14. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

nipy/nibabel: 5.1.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Yaroslav O. Halchenko; Michiel Cottaar; Eric Larson; Satrajit S. Ghosh; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.1.0rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.1.1rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.1.1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.2.0rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.2.0rc2. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

neurostuff/NiMARE: 0.2.0rc3. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2023)

nipy/nibabel: 5.2.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; et al. (Zenodo, 2023)

nipy/nibabel: 5.2.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; Satrajit S. Ghosh; et al. (Zenodo, 2024)

neurostuff/NiMARE: 0.4.0rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2024)

neurostuff/NiMARE: 0.4.0. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2024)

nipy/nibabel: 5.3.0. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Dimitri Papadopoulos Orfanos; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; et al. (Zenodo, 2024)

nipy/nibabel: 5.3.1. - Matthew Brett; Christopher J. Markiewicz; Michael Hanke; Marc-Alexandre Côté; Ben Cipollini; Dimitri Papadopoulos Orfanos; Paul McCarthy; Dorota Jarecka; Christopher P. Cheng; Eric Larson; Yaroslav O. Halchenko; Michiel Cottaar; et al. (Zenodo, 2024)

neurostuff/NiMARE: 0.4.1rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2024)

neurostuff/NiMARE: 0.4.1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2024)

Bridging the Scientific Knowledge Gap and Reproducibility: A Survey of Provenance, Assertion and Evidence Ontologies. - Tek Raj Chhetri; Yaroslav O. Halchenko; Dorota Jarecka; Puja Trivedi; Satrajit S. Ghosh; Patrick Ray; Lydia Ng (WWW (Companion Volume), 2025)

neurostuff/NiMARE: 0.4.2rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

neurostuff/NiMARE: 0.4.2rc2. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

neurostuff/NiMARE: 0.4.2rc3. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

neurostuff/NiMARE: 0.4.2rc4. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

neurostuff/NiMARE: 0.4.2. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

neurostuff/NiMARE: 0.5.0rc1. - Taylor Salo; Tal Yarkoni; Thomas E. Nichols; Jean-Baptiste Poline; James D. Kent; Krzysztof J. Gorgolewski; Enrico Glerean; Katherine L. Bottenhorn; Murat Bilgel; Jessey Wright; Puck Reeders; Adam Kimbler; et al. (Zenodo, 2025)

STRUCTSENSE: A Task-Agnostic Agentic Framework for Structured Information Extraction with Human-In-The-Loop Evaluation and Benchmarking. - Tek Raj Chhetri; Yibei Chen; Puja Trivedi; Dorota Jarecka; Saif Haobsh; Patrick Ray; Lydia Ng; Satrajit S. Ghosh (CoRR, 2025)