Adaptation to Different Human Populations by HIV-1 Revealed by Codon-Based Analyses. - Sergei L. Kosakovsky Pond; Simon D. W. Frost; Zehava Grossman; Michael B. Gravenor; Douglas D. Richman; Andrew J. Leigh Brown (PLoS Comput. Biol., 2006)

Workshop: Error correction, noise filtering, and phylogenetic analysis of HIV sequences using the 454 platform. - Konrad Scheffler; N. Lance Hepler; Martin D. Smith; Wayne Delport; Art F. Y. Poon; Douglas D. Richman; Sergei L. Kosakovsky Pond (ICCABS, 2012)

IDEPI: Rapid Prediction of HIV-1 Antibody Epitopes and Other Phenotypic Features from Sequence Data Using a Flexible Machine Learning Platform. - N. Lance Hepler; Konrad Scheffler; Steven Weaver; Ben Murrell; Douglas D. Richman; Dennis R. Burton; Pascal Poignard; Davey M. Smith; Sergei L. Kosakovsky Pond (PLoS Comput. Biol., 2014)

Assessing intra-lab precision and inter-lab repeatability of outgrowth assays of HIV-1 latent reservoir size. - Daniel I. S. Rosenbloom; Peter Bacchetti; Mars Stone; Xutao Deng; Ronald J. Bosch; Douglas D. Richman; Janet D. Siliciano; John W. Mellors; Steven G. Deeks; Roger G. Ptak; Rebecca Hoh; Sheila M. Keating; et al. (PLoS Comput. Biol., 2019)