AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. - Min Huang; Kun Song 003; Xinyi Liu 003; Shaoyong Lu; Qiancheng Shen; Renxiao Wang; Jingze Gao; Yuanyuan Hong; Qian Li; Duan Ni; Jianrong Xu; Guoqiang Chen; et al. (Nucleic Acids Res., 2018)

Unraveling allosteric landscapes of allosterome with ASD. - Xinyi Liu 003; Shaoyong Lu; Kun Song 003; Qiancheng Shen; Duan Ni; Qian Li; Xinheng He; Hao Zhang; Qi Wang; Yingyi Chen; Xinyi Li; Jing Wu; et al. (Nucleic Acids Res., 2020)

Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation. - Hao Zhang; Duan Ni; Jigang Fan; Minyu Li; Jian Zhang 037; Chen Hua; Ruth Nussinov; Shaoyong Lu (J. Chem. Inf. Model., 2022)

AlloReverse: multiscale understanding among hierarchical allosteric regulations. - Jinyin Zha; Qian Li; Xinyi Liu 003; Weidong Lin; Tingting Wang; Jiacheng Wei; Ziliang Zhang; Xun Lu; Jing Wu; Duan Ni; Kun Song 003; Liang Zhang; et al. (Nucleic Acids Res., 2023)