A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data. - Kenzie D. MacIsaac; D. Benjamin Gordon; Lena Nekludova; Duncan T. Odom; Joerg Schreiber; David K. Gifford; Richard A. Young; Ernest Fraenkel (Bioinform., 2006)

Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation. - Adrien L. S. Jacquin; Duncan T. Odom; Margus Lukk (Bioinform., 2019)