A comparative analysis of smith-waterman based partial alignment. - Taner Aruk; Duran Üstek; Olcay Kursun (ISCC, 2012)

Application of canonical correlation analysis for identifying viral integration preferences. - Ergun Gumus; Olcay Kursun; Ahmet Sertbas; Duran Üstek (Bioinform., 2012)

Improving Genome Assemblies Using Multi-platform Sequence Data. - Pinar Kavak; Bekir Ergüner; Duran Üstek; Bayram Yüksel; Mahmut Samil Sagiroglu; Tunga Güngör; Can Alkan (CIBB, 2015)

Performance comparison of Next Generation sequencing platforms. - Bekir Ergüner; Duran Üstek; Mahmut Samil Sagiroglu (EMBC, 2015)