Inferring similarity between time-series microarrays: A content-based approach. - Duygu Dede Sener; Hasan Ogul (CYBCONF, 2015)

A Content-Based Retrieval Framework for Whole Metagenome Sequencing Samples. - Duygu Dede Sener; Daniele Santoni; Giovanni Felici; Hasan Ogul (J. Integr. Bioinform., 2018)

Experiment retrieval in genomic databases (Genomik veri tabanlarında deney geri getirimi) - Duygu Dede Sener (2019)

Managing food and microbiome studies data using Fairspace, a flexible and FAIR data management platform. - Ewelina Grudzien; Eelke van der Horst; Frank van den Bergh; Maria H. Traka; Duncan Ng; Falk Hildebrand; Chris T. A. Evelo; Susan L. M. Coort; Duygu Dede Sener; Elisa Cirillo (SWAT4HCLS, 2023)

Text-based experiment retrieval in genomic databases. - Duygu Dede Sener; Hasan Ogul; Selen Basak (J. Inf. Sci., 2024)