A novel client-based approach for signing and checking web forms by using XML against DoS attacks. - Kaziim Sarikaya; Duygu Sarikaya; Tamer N. Jarada; Shang Gao 005; Tansel Özyer; Reda Alhajj (iiWAS, 2010)

MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans. - Adriënne M. Mendrik; Koen L. Vincken; Hugo J. Kuijf; Marcel Breeuwer; Willem H. Bouvy; Jeroen de Bresser; Amir Alansary; Marleen de Bruijne; Aaron Carass; Ayman El-Baz; Amod Jog; Ranveer Katyal; et al. (Comput. Intell. Neurosci., 2015)

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS). - Bjoern H. Menze; András Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin S. Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth R. Gerstner; et al. (IEEE Trans. Medical Imaging, 2015)

Detection and Localization of Robotic Tools in Robot-Assisted Surgery Videos Using Deep Neural Networks for Region Proposal and Detection. - Duygu Sarikaya; Jason J. Corso; Khurshid A. Guru (IEEE Trans. Medical Imaging, 2017)

Joint Surgical Gesture and Task Classification with Multi-Task and Multimodal Learning. - Duygu Sarikaya; Khurshid A. Guru; Jason J. Corso (CoRR, 2018)

Surgical Gesture Recognition with Optical Flow only. - Duygu Sarikaya; Pierre Jannin (CoRR, 2019)

Towards Generalizable Surgical Activity Recognition Using Spatial Temporal Graph Convolutional Networks. - Duygu Sarikaya; Pierre Jannin (CoRR, 2020)

Surgical Data Science - from Concepts to Clinical Translation. - Lena Maier-Hein; Matthias Eisenmann; Duygu Sarikaya; Keno März; Toby Collins; Anand Malpani; Johannes Fallert; Hubertus Feussner; Stamatia Giannarou; Pietro Mascagni; Hirenkumar Nakawala; Adrian Park 001; et al. (CoRR, 2020)

Surgical Activity Recognition with Transformer Networks. - Simge Nur Kabatas; Duygu Sarikaya (SIU, 2021)

Special issue on 2020 augmented environments for computer-assisted interventions (AE-CAI): guest editors' foreword. - Cristian A. Linte; Elvis C. S. Chen; Simon Drouin; Marta Kersten-Oertel; Ziv Yaniv; Daniel A. Hashimoto; Qi Dou 001; Xiongbiao Luo; A. Jonathan McLeod; Duygu Sarikaya (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2021)

MIcro-surgical anastomose workflow recognition challenge report. - Arnaud Huaulmé; Duygu Sarikaya; Kévin Le Mut; Fabien Despinoy; Yonghao Long 001; Qi Dou 001; Chin-Boon Chng; Wenjun Lin; Satoshi Kondo; Laura Bravo Sánchez; Pablo Arbeláez; Wolfgang Reiter; et al. (Comput. Methods Programs Biomed., 2021)

MIcro-Surgical Anastomose Workflow recognition challenge report. - Arnaud Huaulmé; Duygu Sarikaya; Kévin Le Mut; Fabien Despinoy; Yonghao Long 001; Qi Dou 001; Chin-Boon Chng; Wenjun Lin; Satoshi Kondo; Laura Bravo Sánchez; Pablo Arbeláez; Wolfgang Reiter; et al. (CoRR, 2021)

Using Human Gaze For Surgical Activity Recognition. - Abdishakour Awale; Duygu Sarikaya (SIU, 2022)

An Efficient Polyp Segmentation Network. - Tugberk Erol; Duygu Sarikaya (SIU, 2022)

Special issue on 2021 augmented environments for computer-assisted interventions (AE-CAI): guest editors' foreword. - Cristian A. Linte; Elvis C. S. Chen; Qi Dou 001; Simon Drouin; Marta Kersten-Oertel; A. Jonathan McLeod; Duygu Sarikaya; Ziv Yaniv (Comput. methods Biomech. Biomed. Eng. Imaging Vis., 2022)

PlutoNet: An Efficient Polyp Segmentation Network. - Tugberk Erol; Duygu Sarikaya (CoRR, 2022)

Surgical data science - from concepts toward clinical translation. - Lena Maier-Hein; Matthias Eisenmann; Duygu Sarikaya; Keno März; Toby Collins; Anand Malpani; Johannes Fallert; Hubertus Feussner; Stamatia Giannarou; Pietro Mascagni; Hirenkumar Nakawala; Adrian Park 001; et al. (Medical Image Anal., 2022)

Automatic Surgical Caption Generation in Nephrectomy Surgery Videos. - Sevdenur Kütük; Marco Bombieri; Diego Dall'Alba; Paolo Fiorini; Duygu Sarikaya (SIU, 2023)

Reinforcement Learning Based Cardiac Ultrasound Video Summarization Using Weak Supervision and Proximity Reward. - Ali Çoban; Ceren GüZel Turhan; Duygu Sarikaya (SIU, 2024)

Generating Automatic Surgical Captions Using a Contrastive Language-Image Pre-Training Model for Nephrectomy Surgery Images. - Sevdenur Kütük; Tuba Çaglikantar; Duygu Sarikaya (SIU, 2024)

SurgRIPE challenge: Benchmark of surgical robot instrument pose estimation. - Haozheng Xu; Alistair Weld; Chi Xu; Alfie Roddan; João Cartucho; Mert Asim Karaoglu; Alexander Ladikos; Yangke Li; Yiping Li; Daiyun Shen; Geonhee Lee; Seyeon Park; et al. (Medical Image Anal., 2025)

SurgRIPE challenge: Benchmark of Surgical Robot Instrument Pose Estimation. - Haozheng Xu; Alistair Weld; Chi Xu; Alfie Roddan; João Cartucho; Mert Asim Karaoglu; Alexander Ladikos; Yangke Li; Yiping Li; Daiyun Shen; Shoujie Yang; Geonhee Lee; et al. (CoRR, 2025)

The Power of Certainty: How Confident Models Lead to Better Segmentation. - Tugberk Erol; Tuba Çaglikantar; Duygu Sarikaya (CoRR, 2025)

Can Diffusion Models Bridge the Domain Gap in Cardiac MR Imaging? - Xin Ci Wong; Duygu Sarikaya; Kieran Zucker; Marc De Kamps; Nishant Ravikumar (CoRR, 2025)

Score Before You Speak: Improving Persona Consistency in Dialogue Generation using Response Quality Scores. - Arpita Saggar; Jonathan C. Darling; Vania Dimitrova; Duygu Sarikaya; David C. Hogg (CoRR, 2025)

NeeCo: Image Synthesis of Novel Instrument States Based on Dynamic and Deformable 3D Gaussian Reconstruction. - Tianle Zeng; Junlei Hu; Gerardo Loza Galindo; Sharib Ali; Duygu Sarikaya; Pietro Valdastri; Dominic Jones (CoRR, 2025)