Constrained search of conformational hyperspace. - Richard A. Dammkoehler; Steven F. Karasek; E. F. Berkley Shands; Garland R. Marshall (J. Comput. Aided Mol. Des., 1989)

Sampling conformational hyperspace: Techniques for improving completeness. - Richard A. Dammkoehler; Steven F. Karasek; E. F. Berkley Shands; Garland R. Marshall (J. Comput. Aided Mol. Des., 1995)

An Architecture for Fast Processing of Large Unstructured Data Sets. - Mark A. Franklin; Roger D. Chamberlain; Michael Henrichs; E. F. Berkley Shands; Jason White (ICCD, 2004)

Auto-Pipe: Streaming Applications on Architecturally Diverse Systems. - Roger D. Chamberlain; Mark A. Franklin; Eric J. Tyson; James H. Buckley; Jeremy Buhler; Greg Galloway; Saurabh Gayen; Michael J. Hall; E. F. Berkley Shands; Naveen Singla (Computer, 2010)

TimeTrial: A low-impact performance profiler for streaming data applications. - Joseph M. Lancaster; E. F. Berkley Shands; Jeremy D. Buhler; Roger D. Chamberlain (ASAP, 2011)