Fidelity Probes for DNA Arrays. - Earl Hubbell; Pavel A. Pevzner (ISMB, 1999)

Multiplex Sequencing by Hybridization. - Earl Hubbell (J. Comput. Biol., 2001)

Robust estimators for expression analysis. - Earl Hubbell; Wei-Min Liu; Rui Mei (Bioinform., 2002)

Analysis of high density expression microarrays with signed-rank call algorithms. - Wei-Min Liu; Rui Mei; Xiaojun Di; Thomas B. Ryder; Earl Hubbell; S. Dee; Teresa A. Webster; C. A. Harrington; Ming-Hsiu Ho; J. Baid; S. P. Smeekens (Bioinform., 2002)

Gene structure-based splice variant deconvolution using a microarry platform. - Hui Wang 007; Earl Hubbell; Jing-Shan Hu; Gangwu Mei; Melissa S. Cline; Gang Lu; Tyson Clark; Michael A. Siani-Rose; Manuel Ares; David Kulp; David Haussler (ISMB (Supplement of Bioinformatics), 2003)

High-Throughput Microarray-Based Genotyping. - Geoffrey Yang; Ming-Hsiu Ho; Earl Hubbell (CSB, 2004)

Dynamic model based algorithms for screening and genotyping over 100K SNPs on oligonucleotide microarrays. - Xiaojun Di; Hajime Matsuzaki; Teresa A. Webster; Earl Hubbell; Guoying Liu; Shoulian Dong; Dan Bartell; Jing Huang 024; Richard Chiles; Geoffrey Yang; Mei-mei Shen; David Kulp; et al. (Bioinform., 2005)

Resolving deconvolution ambiguity in gene alternative splicing. - Yiyuan She; Earl Hubbell; Hui Wang 007 (BMC Bioinform., 2009)

Alignment-free filtering for cfNA fusion fragments. - Xiao Yang; Yasushi Saito; Arjun A. Rao; Hyunsung John Kim; Pranav Singh; Eric Scott; Matthew Larson; Wenying Pan; Mohini Desai; Earl Hubbell (Bioinform., 2019)