Extracting Biochemical Reaction Kinetics from Time Series Data. - Edmund J. Crampin; Patrick E. McSharry; Santiago Schnell (KES, 2004)

Bioinformatics, multiscale modeling and the IUPS Physiome Project. - Peter J. Hunter; Edmund J. Crampin; Poul M. F. Nielsen (Briefings Bioinform., 2008)

A method for visualizing CellML models. - Sarala M. Wimalaratne; Matt D. B. Halstead; Catherine M. Lloyd; Mike T. Cooling; Edmund J. Crampin; Poul M. F. Nielsen (Bioinform., 2009)

Biophysical annotation and representation of CellML models. - Sarala M. Wimalaratne; Matt D. B. Halstead; Catherine M. Lloyd; Edmund J. Crampin; Poul M. F. Nielsen (Bioinform., 2009)

Enzyme catalyzed reactions: From experiment to computational mechanism reconstruction. - Jeyaraman Srividhya; Márcio A. Mourão; Edmund J. Crampin; Santiago Schnell (Comput. Biol. Chem., 2010)

Using artificial neural networks to classify unknown volatile chemicals from the firings of insect olfactory sensory neurons. - Luqman R. Bachtiar; Charles P. Unsworth; Richard D. Newcomb; Edmund J. Crampin (EMBC, 2011)

Predicting odorant chemical class from odorant descriptor values with an assembly of multi-layer perceptrons. - Luqman R. Bachtiar; Charles P. Unsworth; Richard D. Newcomb; Edmund J. Crampin (EMBC, 2011)

Minimum Information About a Simulation Experiment (MIASE). - Dagmar Waltemath; Richard R. Adams; Daniel A. Beard; Frank T. Bergmann; Upinder S. Bhalla; Randall Britten; Vijayalakshmi Chelliah; Mike T. Cooling; Jonathan Cooper; Edmund J. Crampin; Alan Garny; Stefan Hoops; et al. (PLoS Comput. Biol., 2011)

Multilayer Perceptron Classification of Unknown Volatile Chemicals from the Firing Rates of Insect Olfactory Sensory Neurons and Its Application to Biosensor Design. - Luqman R. Bachtiar; Charles P. Unsworth; Richard D. Newcomb; Edmund J. Crampin (Neural Comput., 2013)

Predictive modelling of gene expression from transcriptional regulatory elements. - David M. Budden; Daniel G. Hurley; Edmund J. Crampin (Briefings Bioinform., 2015)

Virtual Reference Environments: a simple way to make research reproducible. - Daniel G. Hurley; David M. Budden; Edmund J. Crampin (Briefings Bioinform., 2015)

NAIL, a software toolset for inferring, analyzing and visualizing regulatory networks. - Daniel G. Hurley; Joseph Cursons; Yi Kan Wang; David M. Budden; Cristin G. Print; Edmund J. Crampin (Bioinform., 2015)

Regulation of ERK-MAPK signaling in human epidermis. - Joseph Cursons; Jerry Gao 003; Daniel G. Hurley; Cristin G. Print; P. Rod Dunbar; Marc Jacobs; Edmund J. Crampin (BMC Syst. Biol., 2015)

Gene expression modelling across multiple cell-lines with MapReduce. - David M. Budden; Edmund J. Crampin (CoRR, 2015)

Examination of the Effects of Heterogeneous Organization of RyR Clusters, Myofibrils and Mitochondria on Ca2+ Release Patterns in Cardiomyocytes. - Vijay Rajagopal; Gregory Bass; Cameron G. Walker; David J. Crossman; Amorita Petzer; Anthony Hickey; Ivo Siekmann; Masahiko Hoshijima; Mark H. Ellisman; Edmund J. Crampin; Christian Soeller (PLoS Comput. Biol., 2015)

Distributed gene expression modelling for exploring variability in epigenetic function. - David M. Budden; Edmund J. Crampin (BMC Bioinform., 2016)

Information theoretic approaches for inference of biological networks from continuous-valued data. - David M. Budden; Edmund J. Crampin (BMC Syst. Biol., 2016)

A computational study of the role of mitochondrial organization on cardiac bioenergetics. - Shouryadipta Ghosh; Edmund J. Crampin; Eric Hanssen; Vijay Rajagopal (EMBC, 2017)

Insights on the impact of mitochondrial organisation on bioenergetics in high-resolution computational models of cardiac cell architecture. - Shouryadipta Ghosh; Kenneth Tran; Lea M. D. Delbridge; Anthony Hickey; Eric Hanssen; Edmund J. Crampin; Vijay Rajagopal (PLoS Comput. Biol., 2018)

Computer-aided modelling of complex physical systems with BondGraphTools. - Peter Cudmore; Peter J. Gawthrop; Michael Pan; Edmund J. Crampin (CoRR, 2019)

Modular assembly of dynamic models in systems biology. - Michael Pan; Peter J. Gawthrop; Joseph Cursons; Edmund J. Crampin (PLoS Comput. Biol., 2021)

Hierarchical semantic composition of biosimulation models using bond graphs. - Niloofar Shahidi; Michael Pan; Soroush Safaei; Kenneth Tran; Edmund J. Crampin; David P. Nickerson (PLoS Comput. Biol., 2021)

Multiscale modelling of desquamation in the interfollicular epidermis. - Claire Miller; Edmund J. Crampin; James M. Osborne (PLoS Comput. Biol., 2022)